RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ACP7Q6ZNF0 438 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 ZNF573Q86YE8 665 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 ODF3L1Q8IXM7 274 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 GAFA1Q96PS6 74 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 GPR61Q9BZJ8 451 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 PRDM13Q9H4Q3 707 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 MTCH1Q9NZJ7 389 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 FBN1P35555 2871 aaKnown RBP7.7□□□□□ -1.18
BRCA1-219ENST00000491747 TSTD3H0UI37 97 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 J3QLI3 93 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 NDUFS6O75380 124 aaKnown RBP7.7□□□□□ -1.18
BRCA1-219ENST00000491747 TUSC2O75896 110 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 NAPSAO96009 420 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 FSHBP01225 129 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 SCTP09683 121 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 TRGC1P0CF51 173 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 GATA3P23771 443 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 SRP14P37108 136 aaKnown RBP7.7□□□□□ -1.18
BRCA1-219ENST00000491747 RND2P52198 227 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 SSTP61278 116 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 ERVK11-1P61568 191 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 ZNF788Q6ZQV5 615 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 THNSL2Q86YJ6 484 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 RAB40CQ96S21 281 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 HES4Q9HCC6 221 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 METRNQ9UJH8 293 aa7.7□□□□□ -1.18
BRCA1-219ENST00000491747 A0A1B0GU03 582 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 OPN1MWP04001 364 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 OPN1MW2P0DN77 364 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 OPN1MW3P0DN78 364 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 BCL2P10415 239 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 SLC25A6P12236 298 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 CEBPDP49716 269 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-219ENST00000491747 FGF12P61328 243 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 MPV17LQ2QL34 196 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PDZD11Q5EBL8 140 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 KLF17Q5JT82 389 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-219ENST00000491747 FAM90A2PQ658T7 463 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 CD177Q8N6Q3 437 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PLPPR1Q8TBJ4 325 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 NEK7Q8TDX7 302 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 P2RX4Q99571 388 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PKIBQ9C010 78 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 CCL28Q9NRJ3 127 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 TRBV24-1A0A075B6N3 115 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 IGKV1D-13A0A0B4J2D9 117 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 ZFP92A6NM28 416 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 SLC33A1O00400 549 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-219ENST00000491747 NXPH3O95157 252 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 IGKV1-13P0DP09 117 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 FABP4P15090 132 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 F2RP25116 425 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 GABRA2P47869 451 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PAX9P55771 341 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PKIAP61925 76 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 HERPUD1Q15011 391 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 CDPF1Q6NVV7 123 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 SAXO1Q8IYX7 474 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 ZNRF1Q8ND25 227 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 FRZBQ92765 325 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 RIMS4Q9H426 269 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-219ENST00000491747 JMJD1CQ15652 2540 aa7.69□□□□□ -1.18
BRCA1-219ENST00000491747 PGLYRP1O75594 196 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 IFNA10P01566 189 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SERPINE2P07093 398 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 BCL3P20749 454 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 GFI1BQ5VTD9 330 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 RNASE11Q8TAA1 199 aaKnown RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 ABHD5Q8WTS1 349 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 RCC1LQ96I51 464 aaKnown RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 C14orf144Q96I85 54 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 GPHA2Q96T91 129 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 PSMG3Q9BT73 122 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 CABLES2Q9BTV7 478 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 IL36RNQ9UBH0 155 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 PITPNC1Q9UKF7 332 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 POLDIP2Q9Y2S7 368 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SOX21Q9Y651 276 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SMCO3A2RU48 225 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 H3BP45 60 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 NXPH2O95156 264 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 IFNA1P01562 189 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SERF2P84101 59 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SSX9Q7RTT3 188 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 PACRGQ96M98 296 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-219ENST00000491747 SDF2L1Q9HCN8 221 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 VAX2Q9UIW0 290 aa7.68□□□□□ -1.18
BRCA1-219ENST00000491747 IGHV3OR16-10A0A075B7F0 116 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 TNFSF12O43508 249 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 NDUFB3O43676 98 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 LY86O95711 162 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 DDTP30046 118 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 PRDX2P32119 198 aa7.67□□□□□ -1.18
BRCA1-219ENST00000491747 HBG1P69891 147 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms