RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 TSPAN14Q8NG11 270 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 OR2K2Q8NGT1 345 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 OR51H1Q8NH63 302 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 MUC7Q8TAX7 377 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 GIMAP1Q8WWP7 306 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 BORCS5Q969J3 196 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 KCTD12Q96CX2 325 aaKnown RBP6.28□□□□□ -1.4
LSM2-213ENST00000491421 YIPF6Q96EC8 236 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 C19orf73Q9NVV2 129 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 BET1LQ9NYM9 111 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 EHFQ9NZC4 300 aa6.28□□□□□ -1.4
LSM2-213ENST00000491421 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.4
LSM2-213ENST00000491421 IZUMO1RA6ND01 250 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 GGCTO75223 188 aaKnown RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 NDUFB8O95169 186 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 HPRT1P00492 218 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 IGHV3-23P01764 117 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 HLA-AP01891 365 aaKnown RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 REG1AP05451 166 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 CRYGCP07315 174 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 DEFA4P12838 97 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 MYOD1P15172 320 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 NQO2P16083 231 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 HIST1H1BP16401 226 aaKnown RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 CTRB1P17538 263 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 PSMB6P28072 239 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 TAS2R46P59540 309 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 TAS2R20P59543 309 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 ODF1Q14990 250 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 CD300EQ496F6 205 aaPredicted RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 C4orf48Q5BLP8 95 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 CTRB2Q6GPI1 263 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 DMBX1Q8NFW5 382 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 OR5H2Q8NGV7 314 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 CD300LFQ8TDQ1 290 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 DYNLRB2Q8TF09 96 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 TM2D3Q9BRN9 247 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 ZNF2Q9BSG1 426 aaPredicted RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 THAP7Q9BT49 309 aaPredicted RBP6.27□□□□□ -1.41
LSM2-213ENST00000491421 COMMD5Q9GZQ3 224 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 TUBA4BQ9H853 241 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 PLEKHA2Q9HB19 425 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 S4R3C0 116 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 SORL1Q92673 2214 aa6.27□□□□□ -1.41
LSM2-213ENST00000491421 TRAV3A0A0B4J244 114 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 C2orf70A6NJV1 201 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 CGB1A6NKQ9 187 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 UPK2O00526 184 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 B3GALNT1O75752 331 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 S1PR2O95136 353 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 OR2C1O95371 312 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 PMP2P02689 132 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 RLN1P04808 185 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 FOLR2P14207 255 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 RPA2P15927 270 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 GNRHRP30968 328 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 PRSS3P35030 304 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 ARL3P36405 182 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 RFX2P48378 723 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 MECP2P51608 486 aaKnown RBP6.26□□□□□ -1.41
LSM2-213ENST00000491421 OR2B8PP59922 312 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 CD81P60033 236 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 ERVK-16P61578 105 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 POU2AF1Q16633 256 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 DHRS11Q6UWP2 260 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 CLEC19AQ6UXS0 136 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 ADAMTSL5Q6ZMM2 481 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 SLC25A46Q96AG3 418 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 EEF1AKMT3Q96AZ1 226 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 MOB3AQ96BX8 217 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 TMEM140Q9NV12 185 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 COMMD9Q9P000 198 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 ANAPC10Q9UM13 185 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 DMRT1Q9Y5R6 373 aa6.26□□□□□ -1.41
LSM2-213ENST00000491421 IGLV11-55A0A075B6I3 123 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 TRBV7-1A0A0A6YYK4 115 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 IGLC7A0M8Q6 106 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 MARCH11A6NNE9 402 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 LGALS9O00182 355 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 PGLYRP1O75594 196 aaPredicted RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 TPPPO94811 219 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 EIF4EP06730 217 aaKnown RBP6.25□□□□□ -1.41
LSM2-213ENST00000491421 FGF2P09038 288 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 LYL1P12980 280 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 HRH1P35367 487 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 GUCA2BQ16661 112 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 HAGHQ16775 308 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 KLK9Q2XQG4 91 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 DEFB114Q30KQ6 69 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 FAM106AQ4KMX7 169 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 CASC10Q5T4H9 136 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 GPHB5Q86YW7 130 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 LAX1Q8IWV1 398 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 CMTM1Q8IZ96 169 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 OR6F1Q8NGZ6 308 aa6.25□□□□□ -1.41
LSM2-213ENST00000491421 CXorf58Q96LI9 332 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms