RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CNN1P51911 297 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CEBPGP53567 150 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 SPCS3P61009 180 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RPL23P62829 140 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 HTD2P86397 168 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 MEF2BQ02080 365 aaPredicted RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PLGLB1Q02325 96 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TGFBR3Q03167 851 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TNFRSF9Q07011 255 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 MZT1Q08AG7 82 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 Q0VG73 95 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF154Q13106 437 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CATR1Q13166 79 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 IQCJQ1A5X6 159 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 VWC2Q2TAL6 325 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 HLA-BQ31612 363 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PIGYQ3MUY2 71 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 SPANXN5Q5MJ07 72 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 SERTAD4-AS1Q5TG53 156 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TSPO2Q5TGU0 170 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PRAMEF20Q5VT98 475 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RAET1LQ5VY80 246 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 NCR3LG1Q68D85 454 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF343Q6P1L6 599 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 Q6P435 159 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAT1Q6PIZ9 186 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 FIP1L1Q6UN15 594 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 LCN15Q6UWW0 184 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CYP2G1PQ6ZSU1 146 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 H2BFWTQ7Z2G1 175 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 MRPL21Q7Z2W9 205 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 NUFIP2Q7Z417 695 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 YRDCQ86U90 279 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RTN4RL2Q86UN3 420 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 MED12LQ86YW9 2145 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF525Q8N782 197 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CYB561D1Q8N8Q1 229 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OR4F5Q8NH21 305 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10D3Q8NH80 312 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OCC1Q8TAD7 63 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 FGFBP3Q8TAT2 258 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 MRPL30Q8TCC3 161 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM170AQ8WVE7 144 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 BCL2L2Q92843 193 aaPredicted RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RPUSD4Q96CM3 377 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 POM121L2Q96KW2 1035 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 JSRP1Q96MG2 331 aaPredicted RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OR4F4Q96R69 305 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 HSD17B10Q99714 261 aaKnown RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BLQ99880 126 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 SMIM7Q9BQ49 75 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 FAM173AQ9BQD7 235 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PCGF1Q9BSM1 259 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CHRDL1Q9BU40 450 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 NDUFAF3Q9BU61 184 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 SH3BGRL3Q9H299 93 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OR51B6Q9H340 312 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB9BQ9NP90 201 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 GLRX2Q9NS18 164 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 DCAF16Q9NXF7 216 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PPP1R14DQ9NXH3 145 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 FKBP11Q9NYL4 201 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TAAR3PQ9P1P4 343 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 HSPB7Q9UBY9 170 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 OR14J1Q9UGF5 321 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAPPC2LQ9UL33 140 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 BOKQ9UMX3 212 aaPredicted RBP1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PPP1R3CQ9UQK1 317 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 POLDIP2Q9Y2S7 368 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 RFNGQ9Y644 331 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 PXMP4Q9Y6I8 212 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 URGCP-MRPS24S4R325 110 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 CEP350Q5VT06 3117 aa1.68□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF407Q9C0G0 2248 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 DYSFO75923 2080 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ARID1AO14497 2285 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TRGV10A0A0A0MS01 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TRBV9A0A0B4J1U6 114 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGHV3-15A0A0B4J1V0 119 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAV24A0A0B4J272 114 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1D-13A0A0B4J2D9 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-6A0A0C4DH72 117 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1B0GV50 99 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1B0GV90 55 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 C5orf49A4QMS7 147 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM210A6NLX4 147 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 C17orf100A8MU93 164 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 B9A039 149 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 ITGB1BP1O14713 200 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 RBFOX2O43251 390 aaKnown RBP eCLIP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SYNGR1O43759 233 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 CIDEAO60543 219 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 YPEL1O60688 119 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 PAGE4O60829 102 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 WDR1O75083 606 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 SS18L1O75177 396 aaPredicted RBP1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 TNFSF13O75888 250 aa1.67□□□□□ -2.14
SNRNP40-207ENST00000491106 MMP23AO75900 390 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms