RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	CTXN2	P0C2S0	81 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	RPL35A	P18077	110 aa	Known RBP	11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	RAB6A	P20340	208 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	CRHBP	P24387	322 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	IRF3	Q14653	427 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	MAP6D1	Q9H9H5	199 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	DAZ1	Q9NQZ3	744 aa	Known RBP	11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	IGKV1D-13	A0A0B4J2D9	117 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	IGHV3-35	A0A0C4DH35	117 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	METTL21EP	A6NDL7	271 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	CGB1	A6NKQ9	187 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	S1PR2	O95136	353 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	IFNA4	P05014	189 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	HSMCR30	P0CW71	290 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	IGKV1-13	P0DP09	117 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	NFYA	P23511	347 aa	Predicted RBP	11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	PTBP1	P26599	531 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	FCGR2B	P31994	310 aa	Predicted RBP	11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	TCTA	P57738	103 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	ARL6IP1	Q15041	203 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	RBMS2	Q15434	407 aa	Known RBP	11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	SSX9	Q7RTT3	188 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR4A5	Q8NH83	315 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	BET1L	Q9NYM9	111 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	THYN1	Q9P016	225 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	SPATA2	Q9UM82	520 aa		11.25	□□□□□ -0.61
AGAP3-222	ENST00000490839	PDCD5	O14737	125 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	TGOLN2	O43493	480 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	BRWD1-AS2	P59051	145 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	PRR20E	P86478	221 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	PRR20C	P86479	221 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	PRR20D	P86480	221 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	PRR20B	P86481	221 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	PRR20A	P86496	221 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	FABP5	Q01469	135 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	MLLT11	Q13015	90 aa	Predicted RBP	11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	ZNF66	Q6ZN08	573 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	C11orf45	Q8TAV5	145 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	VN1R17P	Q8TDU5	208 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	SRSF8	Q9BRL6	282 aa	Known RBP	11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	C11orf68	Q9H3H3	251 aa	Known RBP	11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	ACOT13	Q9NPJ3	140 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	SCN3B	Q9NY72	215 aa		11.24	□□□□□ -0.61
AGAP3-222	ENST00000490839	IGLC7	A0M8Q6	106 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR2B8P	P59922	312 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	NANOS2	P60321	138 aa	Known RBP	11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	TIMM50	Q3ZCQ8	353 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	MFSD4A	Q8N468	514 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR5B3	Q8NH48	314 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	AIFM2	Q9BRQ8	373 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	TAS2R8	Q9NYW2	309 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	FBXL17	Q9UF56	701 aa		11.23	□□□□□ -0.61
AGAP3-222	ENST00000490839	IFITM5	A6NNB3	132 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	MPTX1	A8MV57	137 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	NDUFA4	O00483	81 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	CYB5B	O43169	146 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR10A3	P58181	314 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	CNIH2	Q6PI25	160 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	CD300LF	Q8TDQ1	290 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	C2CD4C	Q8TF44	421 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	BSCL2	Q96G97	398 aa	Predicted RBP	11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	RARRES2	Q99969	163 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	CSTL1	Q9H114	145 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	DCSTAMP	Q9H295	470 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	HRASLS	Q9HDD0	168 aa		11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	ELF5	Q9UKW6	265 aa	Predicted RBP	11.22	□□□□□ -0.61
AGAP3-222	ENST00000490839	TRAV1-2	A0A0B4J238	106 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR2T8	A6NH00	312 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	RPA2	P15927	270 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	RCN1	Q15293	331 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	MSMO1	Q15800	293 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	HACD4	Q5VWC8	232 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	SPSB3	Q6PJ21	355 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	ATP6V0B	Q99437	205 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	COMMD5	Q9GZQ3	224 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839	ATG5	Q9H1Y0	275 aa		11.21	□□□□□ -0.61
AGAP3-222	ENST00000490839		K7EMT4	169 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	RBFOX2	O43251	390 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	5e-9	■■■■■ 31.4
AGAP3-222	ENST00000490839	CTSD	P07339	412 aa	Predicted RBP	11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	FGF2	P09038	288 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	CMC4	P56277	68 aa	Predicted RBP	11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	TAS2R31	P59538	309 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	CDNF	Q49AH0	187 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	THOC7	Q6I9Y2	204 aa	Known RBP	11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	APRG1	Q8IVJ8	170 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	GDPD1	Q8N9F7	314 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	OR11H2	Q8NH07	326 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	GPHA2	Q96T91	129 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	C20orf24	Q9BUV8	137 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	QTRT1	Q9BXR0	403 aa	Known RBP	11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	TPRKB	Q9Y3C4	175 aa		11.2	□□□□□ -0.62
AGAP3-222	ENST00000490839	CASQ2	O14958	399 aa	Predicted RBP	11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	RGS10	O43665	173 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	ADM	P35318	185 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	POU2AF1	Q16633	256 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	LINC00336	Q6ZUF6	198 aa		11.19	□□□□□ -0.62
AGAP3-222	ENST00000490839	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms