RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	FOXL1	Q12952	345 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ELOB	Q15370	118 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	HLA-DRB5	Q30154	266 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	VMA21	Q3ZAQ7	101 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	FBXL19-AS1	Q494R0	122 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TMEM177	Q53S58	311 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	WDR25	Q64LD2	544 aa	Predicted RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	FAM90A2P	Q658T7	463 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF833P	Q6ZTB9	187 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TMEM144	Q7Z5S9	345 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	LYG1	Q8N1E2	194 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	ZNRF1	Q8ND25	227 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	OR1L4	Q8NGR5	311 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	OR9G1	Q8NH87	305 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	GATAD1	Q8WUU5	269 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	PFDN5	Q99471	154 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	LRFN3	Q9BTN0	628 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	MRPL32	Q9BYC8	188 aa	Known RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	SRD5A3	Q9H8P0	318 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	SLC35D1	Q9NTN3	355 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	GAR1	Q9NY12	217 aa	Known RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TECR	Q9NZ01	308 aa	Known RBP	5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TCF19	Q9Y242	345 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	OR51B2	Q9Y5P1	312 aa		5.23	□□□□□ -1.57
FN1-223	ENST00000490833	TRAV39	A0A0B4J263	110 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	C15orf62	A8K5M9	175 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	TMEM178B	H3BS89	294 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	UPK2	O00526	184 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	ACTL6B	O94805	426 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	IGHV2-5	P01817	119 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	CD3E	P07766	207 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	IL6R	P08887	468 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	STAG3L2	P0CL84	134 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	STAG3L3	P0CL85	134 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	NDUFB7	P17568	137 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	WT1	P19544	449 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	HOXA5	P20719	270 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	CEBPD	P49716	269 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	ELL	P55199	621 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	B2M	P61769	119 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	SNRPE	P62304	92 aa	Known RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	TLE1	Q04724	770 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	FAM27E3	Q08E93	113 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	ARL16	Q0P5N6	197 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	KIAA0141	Q14154	515 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	HABP2	Q14520	560 aa	Predicted RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	C17orf58	Q2M2W7	97 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	ZNF674	Q2M3X9	581 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	CT45A1	Q5HYN5	189 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	CYB5R2	Q6BCY4	276 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	OR4A47	Q6IF82	309 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	VHLL	Q6RSH7	139 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	BTNL3	Q6UXE8	466 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	HAPLN4	Q86UW8	402 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	TEX45	Q8NA69	505 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	OR5AN1	Q8NGI8	311 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	OR10X1	Q8NGY0	326 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	OR4F5	Q8NH21	305 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	CT45A3	Q8NHU0	189 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	SMIM12	Q96EX1	92 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	DOCK7	Q96N67	2140 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	RBM14	Q96PK6	669 aa	Known RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	GAFA1	Q96PS6	74 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	OR4F4	Q96R69	305 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	GPHA2	Q96T91	129 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	C12orf57	Q99622	126 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	PYGO2	Q9BRQ0	406 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	QTRT1	Q9BXR0	403 aa	Known RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	DYNLRB1	Q9NP97	96 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	LSM4	Q9Y4Z0	139 aa	Known RBP	5.22	□□□□□ -1.57
FN1-223	ENST00000490833	RNF114	Q9Y508	228 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	LAMA1	P25391	3075 aa		5.22	□□□□□ -1.57
FN1-223	ENST00000490833	BDP1	A6H8Y1	2624 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	SAA2-SAA4	A0A096LPE2	208 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	TRBV9	A0A0B4J1U6	114 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833		A0A0G2JNJ9	132 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833		A0A1W2PRE2	83 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	DEFB108A	A8MXU0	73 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833		C9JCJ5	164 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	NXPH3	O95157	252 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	TYMS	P04818	313 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	SAA2	P0DJI9	122 aa	Predicted RBP	5.21	□□□□□ -1.58
FN1-223	ENST00000490833	CHRNB4	P30926	498 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	TDGF1P3	P51864	188 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	BRWD1-AS2	P59051	145 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	BPIFB3	P59826	476 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	RPL8	P62917	257 aa	Known RBP	5.21	□□□□□ -1.58
FN1-223	ENST00000490833	FABP9	Q0Z7S8	132 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	ADIPOQ	Q15848	244 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	OR2B11	Q5JQS5	317 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	NCMAP	Q5T1S8	102 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	LRP11	Q86VZ4	500 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	ZNF439	Q8NDP4	499 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	OR2T10	Q8NGZ9	312 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	NEUROG1	Q92886	237 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	RNASE6	Q93091	150 aa	Known RBP	5.21	□□□□□ -1.58
FN1-223	ENST00000490833	TIMD4	Q96H15	378 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	YPEL4	Q96NS1	127 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	C20orf24	Q9BUV8	137 aa		5.21	□□□□□ -1.58
FN1-223	ENST00000490833	RAB1B	Q9H0U4	201 aa		5.21	□□□□□ -1.58

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