RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 OR5H6Q8NGV6 325 aa14.88□□□□□ -0.03
SREBF1-216ENST00000490796 WDR89Q96FK6 387 aaPredicted RBP14.88□□□□□ -0.03
SREBF1-216ENST00000490796 CXorf58Q96LI9 332 aa14.88□□□□□ -0.03
SREBF1-216ENST00000490796 FANCD2OSQ96PS1 177 aa14.88□□□□□ -0.03
SREBF1-216ENST00000490796 FAM110AQ9BQ89 295 aa14.88□□□□□ -0.03
SREBF1-216ENST00000490796 HIPK2Q9H2X6 1198 aa14.88□□□□□ -0.03
SREBF1-216ENST00000490796 TRBV7-1A0A0A6YYK4 115 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 SULT1C2O00338 296 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 CYB5BO43169 146 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 ATP6V1G2O95670 118 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 NQO2P16083 231 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 CTRB1P17538 263 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 CBX5P45973 191 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 BRWD1-AS2P59051 145 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 TIMM50Q3ZCQ8 353 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 CTRB2Q6GPI1 263 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 CCDC140Q96MF4 163 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 COMMD5Q9GZQ3 224 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 ZC4H2Q9NQZ6 224 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 THYN1Q9P016 225 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 DMRT1Q9Y5R6 373 aa14.87□□□□□ -0.03
SREBF1-216ENST00000490796 RBFOX2O43251 390 aaKnown RBP eCLIP14.86□□□□□ -0.031e-8■■■■■ 42.3
SREBF1-216ENST00000490796 HPRT1P00492 218 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 MYOD1P15172 320 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 EDN2P20800 178 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 TAS2R31P59538 309 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 HERV-K104P61576 105 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 ANKRD55Q3KP44 614 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 LINC00322Q6ZN03 302 aaPredicted RBP14.86□□□□□ -0.03
SREBF1-216ENST00000490796 TMEM17Q86X19 198 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 DMBX1Q8NFW5 382 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 OR52B4Q8NGK2 314 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 CD300LFQ8TDQ1 290 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 CACNG8Q8WXS5 425 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 BORCS5Q969J3 196 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 SLC25A38Q96DW6 304 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 WFDC10AQ9H1F0 79 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 RNF167Q9H6Y7 350 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 AUNIPQ9H7T9 357 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 IFT46Q9NQC8 304 aa14.86□□□□□ -0.03
SREBF1-216ENST00000490796 A0A1B0GW64 132 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 JTBO76095 146 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 CLEC3BP05452 202 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 AADACL3Q5VUY0 350 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 UXS1Q8NBZ7 420 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 OR51H1Q8NH63 302 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 SELENOKQ9Y6D0 94 aa14.85□□□□□ -0.03
SREBF1-216ENST00000490796 IGLV11-55A0A075B6I3 123 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 RBMY1BA6NDE4 496 aaKnown RBP14.84□□□□□ -0.03
SREBF1-216ENST00000490796 RBMY1EA6NEQ0 496 aaKnown RBP14.84□□□□□ -0.03
SREBF1-216ENST00000490796 UPK2O00526 184 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 RBMY1DP0C7P1 496 aaKnown RBP14.84□□□□□ -0.03
SREBF1-216ENST00000490796 OR2B8PP59922 312 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 ERVK-16P61578 105 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 NEDD8Q15843 81 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 RBPMS2Q6ZRY4 209 aaKnown RBP14.84□□□□□ -0.03
SREBF1-216ENST00000490796 OR5AP2Q8NGF4 316 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 GIMAP1Q8WWP7 306 aa14.84□□□□□ -0.03
SREBF1-216ENST00000490796 STARD9Q9P2P6 4700 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 TMEM213A2RRL7 107 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 MFSD2BA6NFX1 497 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 A8MWP6 167 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 SCAF4O95104 1147 aaKnown RBP14.83□□□□□ -0.04
SREBF1-216ENST00000490796 GPR183P32249 361 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 PLET1Q6UQ28 207 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 ZNF818PQ6ZRF7 136 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 TMEM61Q8N0U2 210 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 MARC2Q969Z3 335 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 S100A16Q96FQ6 103 aaKnown RBP14.83□□□□□ -0.04
SREBF1-216ENST00000490796 SRSF8Q9BRL6 282 aaKnown RBP14.83□□□□□ -0.04
SREBF1-216ENST00000490796 QTRT1Q9BXR0 403 aaKnown RBP14.83□□□□□ -0.04
SREBF1-216ENST00000490796 TMEM140Q9NV12 185 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 UFC1Q9Y3C8 167 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 CSMD3Q7Z407 3707 aa14.83□□□□□ -0.04
SREBF1-216ENST00000490796 MEIS3P1A6NDR6 274 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 TMEM127O75204 238 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 KLK9Q2XQG4 91 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 TM4SF20Q53R12 229 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 BTNL8Q6UX41 500 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 PLEKHA2Q9HB19 425 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 EHFQ9NZC4 300 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 MLXQ9UH92 298 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 KLK9Q9UKQ9 250 aa14.82□□□□□ -0.04
SREBF1-216ENST00000490796 TRAV3A0A0B4J244 114 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 IGLC7A0M8Q6 106 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 CGB1A6NKQ9 187 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 S1PR2O95136 353 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 RPA2P15927 270 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 POU2AF1Q16633 256 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 ZNF585BQ52M93 769 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 THOC7Q6I9Y2 204 aaKnown RBP14.81□□□□□ -0.04
SREBF1-216ENST00000490796 CROCCP3Q8IVE0 287 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 TSPAN14Q8NG11 270 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 COMMD9Q9P000 198 aa14.81□□□□□ -0.04
SREBF1-216ENST00000490796 DNAH1Q9P2D7 4330 aa14.8□□□□□ -0.04
SREBF1-216ENST00000490796 XRCC3O43542 346 aa14.8□□□□□ -0.04
SREBF1-216ENST00000490796 TRAPPC2P0DI81 140 aa14.8□□□□□ -0.04
SREBF1-216ENST00000490796 TRAPPC2BP0DI82 140 aa14.8□□□□□ -0.04
SREBF1-216ENST00000490796 PTBP1P26599 531 aaKnown RBP eCLIP14.8□□□□□ -0.04
SREBF1-216ENST00000490796 SLC25A24Q6NUK1 477 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms