RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 ANXA10Q9UJ72 324 aa11.82□□□□□ -0.52
PLOD3-216ENST00000489927 TRAV25A0A0B4J276 109 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 NUPR2A6NF83 97 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 TNFSF12O43508 249 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 SSX5O60225 188 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 GPR183P32249 361 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 TNFRSF9Q07011 255 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 LYG2Q86SG7 212 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 WFDC3Q8IUB2 231 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
PLOD3-216ENST00000489927 MRPL27Q9P0M9 148 aaKnown RBP11.81□□□□□ -0.52
PLOD3-216ENST00000489927 IGHV3-35A0A0C4DH35 117 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 ANKRD65E5RJM6 399 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 SPRY2O43597 315 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 GALP22466 123 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 GNG2P59768 71 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 OR2B8PP59922 312 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 TIMM50Q3ZCQ8 353 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 OR2C3Q8N628 320 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 KRTAP17-1Q9BYP8 105 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 HRASLSQ9HDD0 168 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 TP53TG1Q9Y2A0 90 aa11.8□□□□□ -0.52
PLOD3-216ENST00000489927 IGLC7A0M8Q6 106 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 BMI1P35226 326 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 APOC4P55056 127 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 DEFB135Q30KP9 77 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 CEMP1Q6PRD7 247 aaPredicted RBP11.79□□□□□ -0.52
PLOD3-216ENST00000489927 PLET1Q6UQ28 207 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 Q6ZWC4 215 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 SPAG16Q8N0X2 631 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 OR4A5Q8NH83 315 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 C5orf66Q9H5L9 145 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 CCL28Q9NRJ3 127 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 UFC1Q9Y3C8 167 aa11.79□□□□□ -0.52
PLOD3-216ENST00000489927 HERC2O95714 4834 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 NOTOA8MTQ0 251 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 PTHLHP12272 177 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 ELLP55199 621 aaPredicted RBP11.78□□□□□ -0.52
PLOD3-216ENST00000489927 SLC38A6Q8IZM9 456 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 OR13F1Q8NGS4 319 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 SPAG8Q99932 426 aaPredicted RBP11.78□□□□□ -0.52
PLOD3-216ENST00000489927 AIFM2Q9BRQ8 373 aa11.78□□□□□ -0.52
PLOD3-216ENST00000489927 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
PLOD3-216ENST00000489927 SULT1C2O00338 296 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 SCGNO76038 276 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 PTBP1P26599 531 aaKnown RBP eCLIP11.77□□□□□ -0.53
PLOD3-216ENST00000489927 FCGR2CP31995 323 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 TAS2R31P59538 309 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 MSMO1Q15800 293 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 ZNF773Q6PK81 442 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 LGALS14Q8TCE9 139 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 TMEM190Q8WZ59 177 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 COMMD5Q9GZQ3 224 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 DAPK2Q9UIK4 370 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 DNAH10Q8IVF4 4471 aa11.77□□□□□ -0.53
PLOD3-216ENST00000489927 UPK2O00526 184 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 UBE2CO00762 179 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 TSPAN4O14817 238 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 RBFOX2O43251 390 aaKnown RBP eCLIP11.76□□□□□ -0.53
PLOD3-216ENST00000489927 TGOLN2O43493 480 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 RPA2P15927 270 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 ARPC4P59998 168 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 POU2AF1Q16633 256 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 ODF3L2Q3SX64 289 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 RPP25LQ8N5L8 163 aaKnown RBP11.76□□□□□ -0.53
PLOD3-216ENST00000489927 GVQW1Q8N7I0 195 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 BEST4Q8NFU0 473 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 OR10W1Q8NGF6 305 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 CNBD2Q96M20 576 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
PLOD3-216ENST00000489927 THYN1Q9P016 225 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 BLOC1S6Q9UL45 172 aa11.76□□□□□ -0.53
PLOD3-216ENST00000489927 OR2T8A6NH00 312 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 HPRT1P00492 218 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 PPYP01298 95 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 NQO2P16083 231 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 FGF9P31371 208 aaPredicted RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 VN1R17PQ8TDU5 208 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 RNF183Q96D59 192 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 SRSF8Q9BRL6 282 aaKnown RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 QTRT1Q9BXR0 403 aaKnown RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 DAZ1Q9NQZ3 744 aaKnown RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 RHBDL2Q9NX52 303 aa11.75□□□□□ -0.53
PLOD3-216ENST00000489927 KLK5Q9Y337 293 aaPredicted RBP11.75□□□□□ -0.53
PLOD3-216ENST00000489927 KIR2DL5BA0A0G2JN68 375 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 KIR2DL5BA0A0G2JPC4 375 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 S1PR2O95136 353 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 RPL35AP18077 110 aaKnown RBP11.74□□□□□ -0.53
PLOD3-216ENST00000489927 WT1-ASQ06250 92 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 CATR1Q13166 79 aa11.74□□□□□ -0.53
PLOD3-216ENST00000489927 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms