RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 DRAXINQ8NBI3 349 aaPredicted RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 NECAP1Q8NC96 275 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 SRSF12Q8WXF0 261 aaKnown RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 RITA1Q96K30 269 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 GGTLC1Q9BX51 225 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 FBXL17Q9UF56 701 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 KCNK7Q9Y2U2 307 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 NACAE9PAV3 2078 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 IGKV1-6A0A0C4DH72 117 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CRYZL1O95825 349 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 HLA-DQB1P01920 261 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CTRB1P17538 263 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 S100GP29377 79 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 DUTP33316 252 aaKnown RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 RHOGP84095 191 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 RBMS2Q15434 407 aaKnown RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 LGALS9BQ3B8N2 356 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CD300EQ496F6 205 aaPredicted RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CTRB2Q6GPI1 263 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 ADAD2Q8NCV1 583 aaKnown RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 OR4A5Q8NH83 315 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CD300LFQ8TDQ1 290 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 MARC2Q969Z3 335 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 S100A16Q96FQ6 103 aaKnown RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 CXorf58Q96LI9 332 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 PARP12Q9H0J9 701 aaKnown RBP5.38□□□□□ -1.55
COL9A1-209ENST00000489861 OR51E2Q9H255 320 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 RHBDL2Q9NX52 303 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 ANXA10Q9UJ72 324 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 SPATA2Q9UM82 520 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 TP53TG1Q9Y2A0 90 aa5.38□□□□□ -1.55
COL9A1-209ENST00000489861 A0A087WXM4 84 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 LOC102724200A0A096LPH7 203 aaPredicted RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TRBV7-1A0A0A6YYK4 115 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TRAV25A0A0B4J276 109 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 LOC100506127A0A0U1RQW1 187 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 LGALS9O00182 355 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 FCGR3BO75015 233 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TNFAIP8O95379 198 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 IGLV2-23P01705 113 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 IFNA4P05014 189 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 CRYGBP07316 175 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 FGF2P09038 288 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 DEFA4P12838 97 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 MYOD1P15172 320 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 SDC2P34741 201 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 RPL27AP46776 148 aaKnown RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TNP2Q05952 138 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 PRSS8Q16651 343 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 IDNKQ5T6J7 187 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 Q6ZR54 194 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 Q6ZWC4 215 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 HSD17B13Q7Z5P4 300 aaPredicted RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 C5orf24Q7Z6I8 188 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TTC9CQ8N5M4 171 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 BEST4Q8NFU0 473 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 LGALS14Q8TCE9 139 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TCTEX1D2Q8WW35 142 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 EEF1AKMT3Q96AZ1 226 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 OR2A7Q96R45 310 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 SRSF8Q9BRL6 282 aaKnown RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 IFT46Q9NQC8 304 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 ZNF230Q9UIE0 474 aaPredicted RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 FBXL7Q9UJT9 491 aa5.37□□□□□ -1.55
COL9A1-209ENST00000489861 RBMX2Q9Y388 322 aaKnown RBP5.37□□□□□ -1.55
COL9A1-209ENST00000489861 TRAV18A0A075B6X5 111 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.36□□□□□ -1.55
COL9A1-209ENST00000489861 SMIM31A0A1B0GVY4 71 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 TMEM235A6NFC5 223 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 NPIPB5A8MRT5 1133 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 PROP1O75360 226 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 SAA1P0DJI8 122 aaPredicted RBP5.36□□□□□ -1.55
COL9A1-209ENST00000489861 APOC4P55056 127 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 CMC4P56277 68 aaPredicted RBP5.36□□□□□ -1.55
COL9A1-209ENST00000489861 TAS2R46P59540 309 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 HERV-K104P61576 105 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 ERVK-16P61578 105 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 NEDD8Q15843 81 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 GUCA2BQ16661 112 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 MRGPRG-AS1Q2M3A8 158 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 UBE2NLQ5JXB2 153 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 LPCAT3Q6P1A2 487 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 HOGA1Q86XE5 327 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 CMTM1Q8IZ96 169 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 SLC38A6Q8IZM9 456 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 POM121L12Q8N7R1 296 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 MAFIPQ8WZ33 124 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 CMTM3Q96MX0 182 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 FYTTD1Q96QD9 318 aaKnown RBP5.36□□□□□ -1.55
COL9A1-209ENST00000489861 ATP6V0BQ99437 205 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 C6orf62Q9GZU0 229 aaPredicted RBP5.36□□□□□ -1.55
COL9A1-209ENST00000489861 AKIP1Q9NQ31 210 aa5.36□□□□□ -1.55
COL9A1-209ENST00000489861 IGLV2-18A0A075B6J9 118 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 TRBV9A0A0B4J1U6 114 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 A8MWP6 167 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 UBE2CO00762 179 aa5.35□□□□□ -1.55
COL9A1-209ENST00000489861 RBFOX2O43251 390 aaKnown RBP eCLIP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms