RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
FAM3D-204ENST00000489857 KLK5Q9Y337 293 aaPredicted RBP11.13□□□□□ -0.63
FAM3D-204ENST00000489857 DEFA4P12838 97 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 HLA-GP17693 338 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 ELLP55199 621 aaPredicted RBP11.12□□□□□ -0.63
FAM3D-204ENST00000489857 NR2C2APQ86WQ0 139 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 NUDCD2Q8WVJ2 157 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 RNF183Q96D59 192 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
FAM3D-204ENST00000489857 CCDC90BQ9GZT6 254 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 VCXQ9H320 206 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 C5orf66Q9H5L9 145 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
FAM3D-204ENST00000489857 UBE2CO00762 179 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 S1PR2O95136 353 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 OR2B8PP59922 312 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 ARL6IP1Q15041 203 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 ODF3L2Q3SX64 289 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 TIMM50Q3ZCQ8 353 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 CNIH2Q6PI25 160 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 ZNF66Q6ZN08 573 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 PRSS48Q7RTY5 328 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 SLC38A6Q8IZM9 456 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 ZNF436Q9C0F3 470 aaPredicted RBP11.11□□□□□ -0.63
FAM3D-204ENST00000489857 DCSTAMPQ9H295 470 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 BET1LQ9NYM9 111 aa11.11□□□□□ -0.63
FAM3D-204ENST00000489857 KIR2DL5BA0A0G2JN68 375 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 KIR2DL5BA0A0G2JPC4 375 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 IGLC7A0M8Q6 106 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 TSPAN4O14817 238 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 SSX5O60225 188 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 HRASP01112 189 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 RAB3BP20337 219 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 PLET1Q6UQ28 207 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 KIR2DL5AQ8N109 375 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 KIR2DL5BQ8NHK3 375 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
FAM3D-204ENST00000489857 PCLOQ9Y6V0 5065 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 TRAV3A0A0B4J244 114 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 SMIM30A4D0T7 59 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 TMEM235A6NFC5 223 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 TNFSF12O43508 249 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 RPA2P15927 270 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
FAM3D-204ENST00000489857 MYL9P24844 172 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 PTBP1P26599 531 aaKnown RBP eCLIP11.09□□□□□ -0.63
FAM3D-204ENST00000489857 AQP4P55087 323 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 PHLDA1Q8WV24 401 aaPredicted RBP11.09□□□□□ -0.63
FAM3D-204ENST00000489857 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 ANXA10Q9UJ72 324 aa11.09□□□□□ -0.63
FAM3D-204ENST00000489857 HECTD4Q9Y4D8 3996 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 TRDV1A0A1B0GX56 115 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 TGOLN2O43493 480 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 FCGR2BP31994 310 aaPredicted RBP11.08□□□□□ -0.64
FAM3D-204ENST00000489857 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 SPAG16Q8N0X2 631 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 TMEM217Q8N7C4 229 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 HRASLSQ9HDD0 168 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
FAM3D-204ENST00000489857 VPS13DQ5THJ4 4388 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 UPK2O00526 184 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 TBCEQ15813 527 aaPredicted RBP11.07□□□□□ -0.64
FAM3D-204ENST00000489857 C22orf42Q6IC83 251 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 ZNF367Q7RTV3 350 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 OR10W1Q8NGF6 305 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 VN1R17PQ8TDU5 208 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 SECTM1Q8WVN6 248 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 DAZ1Q9NQZ3 744 aaKnown RBP11.07□□□□□ -0.64
FAM3D-204ENST00000489857 NDUFB11Q9NX14 153 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 THYN1Q9P016 225 aa11.07□□□□□ -0.64
FAM3D-204ENST00000489857 OR2T8A6NH00 312 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 OR4C46A6NHA9 309 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 RBFOX2O43251 390 aaKnown RBP eCLIP11.06□□□□□ -0.64
FAM3D-204ENST00000489857 PTHLHP12272 177 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 GNG2P59768 71 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 MSMO1Q15800 293 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 POU2AF1Q16633 256 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 LAMTOR1Q6IAA8 161 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 OR5B3Q8NH48 314 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 NRG4Q8WWG1 115 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 GALNT14Q96FL9 552 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 SRSF8Q9BRL6 282 aaKnown RBP11.06□□□□□ -0.64
FAM3D-204ENST00000489857 CHRDL1Q9BU40 450 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 COMMD5Q9GZQ3 224 aa11.06□□□□□ -0.64
FAM3D-204ENST00000489857 IGHV3OR16-8A0A075B7F1 116 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 SULT1C2O00338 296 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 CTSDP07339 412 aaPredicted RBP11.05□□□□□ -0.64
FAM3D-204ENST00000489857 FCGR2CP31995 323 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 MFAP2P55001 183 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 TAS2R31P59538 309 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 WT1-ASQ06250 92 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 OR13F1Q8NGS4 319 aa11.05□□□□□ -0.64
FAM3D-204ENST00000489857 AIFM2Q9BRQ8 373 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms