RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 SLC35F6Q8N357 371 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 CNEP1R1Q8N9A8 125 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 GDPD1Q8N9F7 314 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.29□□□□□ -2.2
NF1-213ENST00000489712 Q8NAQ8 132 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 OR8B12Q8NGG6 310 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 OR4X1Q8NH49 305 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 MUC7Q8TAX7 377 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 MRPL30Q8TCC3 161 aaKnown RBP1.29□□□□□ -2.2
NF1-213ENST00000489712 FAM172AQ8WUF8 416 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 PRRT1Q99946 306 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 UPK3BQ9BT76 320 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 WDR61Q9GZS3 305 aaKnown RBP1.29□□□□□ -2.2
NF1-213ENST00000489712 ARMC1Q9NVT9 282 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 PAQR5Q9NXK6 330 aaPredicted RBP1.29□□□□□ -2.2
NF1-213ENST00000489712 KLK5Q9Y337 293 aaPredicted RBP1.29□□□□□ -2.2
NF1-213ENST00000489712 HEY1Q9Y5J3 304 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 R4GN34 69 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 CCDC144AA2RUR9 1427 aa1.29□□□□□ -2.2
NF1-213ENST00000489712 hCG_1818297A0A087WSY0 165 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 A0A0J9YY10 115 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 FAM236DA0A1B0GTK5 79 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 A0A1B0GX78 115 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 OR5K4A6NMS3 321 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 A8MT66 165 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 A8MUN3 132 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 TMEM238C9JI98 176 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 FAAHO00519 579 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 CREBL2O60519 120 aaPredicted RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 SOD1P00441 154 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 IFNA1P01562 189 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 IFNA10P01566 189 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 FABP1P07148 127 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 C8GP07360 202 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 FAM236CP0DP71 79 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 IFI30P13284 250 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 PPIBP23284 216 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 ERP29P30040 261 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 RBM11P57052 281 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 RAB14P61106 215 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 HIST1H4AP62805 103 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 HBA1P69905 142 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 RPL22L1Q6P5R6 122 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 TMPPEQ6ZT21 453 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 SSX8Q7RTT4 187 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 SPATA12Q7Z6I5 190 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 MSRB3Q8IXL7 192 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 PACRGLQ8N7B6 248 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 OR13C6PQ8NH95 151 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 SGMS2Q8NHU3 365 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 NEK7Q8TDX7 302 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 LMX1AQ8TE12 382 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 KLK6Q92876 244 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 ZHX1-C8orf76Q96EF9 292 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 NIPSNAP1Q9BPW8 284 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 TM2D3Q9BRN9 247 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 TRABDQ9H4I3 376 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 EFCAB1Q9HAE3 211 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 CISHQ9NSE2 258 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 UQCC1Q9NVA1 299 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 C14orf105Q9NVL8 296 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 FBXL12Q9NXK8 326 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 IDI2-AS1Q9NZ38 188 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 NUP155O75694 1391 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 ROCK1Q13464 1354 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 EIF3AQ14152 1382 aaKnown RBP1.28□□□□□ -2.2
NF1-213ENST00000489712 MTUS2Q5JR59 1369 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 PIK3C2GO75747 1445 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 WRNQ14191 1432 aaPredicted RBP eCLIP1.28□□□□□ -2.2
NF1-213ENST00000489712 DSCAML1Q8TD84 2053 aa1.28□□□□□ -2.2
NF1-213ENST00000489712 NLRC5Q86WI3 1866 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 ITGB4P16144 1822 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 PCF11O94913 1555 aaKnown RBP1.27□□□□□ -2.21
NF1-213ENST00000489712 EXOC1LA0A1B0GW35 172 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 A0A1W2PQD3 144 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 IRGMA1A4Y4 181 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 VPS37CA5D8V6 355 aaPredicted RBP1.27□□□□□ -2.21
NF1-213ENST00000489712 C19orf71A6NCJ1 209 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 DPRXA6NFQ7 191 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 FAM159BA6NKW6 160 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 G3V3Q6 166 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 J3QRK9 145 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 AIPO00170 330 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 PGRMC1O00264 195 aaKnown RBP1.27□□□□□ -2.21
NF1-213ENST00000489712 HMGB3O15347 200 aaKnown RBP1.27□□□□□ -2.21
NF1-213ENST00000489712 KLRC4O43908 158 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 PFDN1O60925 122 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 PRM2P04554 102 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 OR4E1P0C645 316 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 SULT1A3P0DMM9 295 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 SULT1A4P0DMN0 295 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 CCL3P10147 92 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 HRES1P13985 223 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 ZNF22P17026 224 aaPredicted RBP1.27□□□□□ -2.21
NF1-213ENST00000489712 HIST1H2BOP23527 126 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 CD24P25063 80 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 HIST1H2BBP33778 126 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 XCL1P47992 114 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 EMP1P54849 157 aa1.27□□□□□ -2.21
NF1-213ENST00000489712 TCTAP57738 103 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms