RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 C11orf44Q8N8P7 122 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 SRSF12Q8WXF0 261 aaKnown RBP9.76□□□□□ -0.85
COL4A5-206ENST00000489230 IL22RA2Q969J5 263 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 GALNT14Q96FL9 552 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 TP53RKQ96S44 253 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
COL4A5-206ENST00000489230 SRSF8Q9BRL6 282 aaKnown RBP9.76□□□□□ -0.85
COL4A5-206ENST00000489230 SLA2Q9H6Q3 261 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 VSIG4Q9Y279 399 aa9.76□□□□□ -0.85
COL4A5-206ENST00000489230 G3V318 75 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 LYRM1O43325 122 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 NDUFB6O95139 128 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 DHFRP00374 187 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 PSMB8P28062 276 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 RPL27AP46776 148 aaKnown RBP9.75□□□□□ -0.85
COL4A5-206ENST00000489230 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
COL4A5-206ENST00000489230 RAB9AP51151 201 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 RAB25P57735 213 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 SRSF4Q08170 494 aaKnown RBP9.75□□□□□ -0.85
COL4A5-206ENST00000489230 ECSCRQ19T08 205 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 SP6Q3SY56 376 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 TMED4Q7Z7H5 227 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 CENPSQ8N2Z9 138 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 OR4F17Q8NGA8 305 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 OR1L8Q8NGR8 309 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 GLYATL2Q8WU03 294 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 SEC22AQ96IW7 307 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 TMEM56Q96MV1 263 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 OR4F4Q96R69 305 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 TMEM56-RWDD3S4R434 201 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 TGP01266 2768 aa9.75□□□□□ -0.85
COL4A5-206ENST00000489230 A0A0G2JLM5 398 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 A0A1W2PN81 502 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 PLA2G10O15496 165 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 CYB5BO43169 146 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 UPK1BO75841 260 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 OR5AC1P0C628 307 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 TRAPPC2P0DI81 140 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 TRAPPC2BP0DI82 140 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 PF4V1P10720 104 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 CHRNA7P36544 502 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 CCR6P51684 374 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 AKR1C2P52895 323 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 NDPQ00604 133 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 TCTEX1D4Q5JR98 221 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 LGI3Q8N145 548 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 TTC9CQ8N5M4 171 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 ADAD2Q8NCV1 583 aaKnown RBP9.74□□□□□ -0.85
COL4A5-206ENST00000489230 OR5B3Q8NH48 314 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 RNASE11Q8TAA1 199 aaKnown RBP9.74□□□□□ -0.85
COL4A5-206ENST00000489230 RBPMSQ93062 196 aaKnown RBP9.74□□□□□ -0.85
COL4A5-206ENST00000489230 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 FAM103A1Q9BTL3 118 aaKnown RBP9.74□□□□□ -0.85
COL4A5-206ENST00000489230 ZNF355PQ9NSJ1 428 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 ZNF257Q9Y2Q1 563 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 PKD1L1Q8TDX9 2849 aa9.74□□□□□ -0.85
COL4A5-206ENST00000489230 TEX50A0A1B0GTY4 177 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 OR9G9P0C7N8 305 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 DEFA1P59665 94 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 DEFA3P59666 94 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 SSBP2P81877 361 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 ASAH1Q13510 395 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 KHDC1LQ5JSQ8 128 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 LSM10Q969L4 123 aaKnown RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 FYTTD1Q96QD9 318 aaKnown RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 QTRT1Q9BXR0 403 aaKnown RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 ALX4Q9H161 411 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-206ENST00000489230 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 OR51B2Q9Y5P1 312 aa9.73□□□□□ -0.85
COL4A5-206ENST00000489230 FAM240BA0A1B0GVZ2 78 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 DUXBA0A1W2PPF3 345 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 NPIPB5A8MRT5 1133 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 IGKV1-39P01597 117 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 IGKV1D-39P04432 117 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 HIST1H1BP16401 226 aaKnown RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 VAMP1P23763 118 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 OR2B8PP59922 312 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 HSPE1P61604 102 aaKnown RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 TMEM187Q14656 261 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 ZNF429Q86V71 674 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 SELENOHQ8IZQ5 122 aaKnown RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 OR1L6Q8NGR2 347 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 PDCD10Q9BUL8 212 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-206ENST00000489230 TMEM14BQ9NUH8 114 aa9.72□□□□□ -0.85
COL4A5-206ENST00000489230 TRAV3A0A0B4J244 114 aa9.71□□□□□ -0.86
COL4A5-206ENST00000489230 A0A0B4J2A0 478 aa9.71□□□□□ -0.86
COL4A5-206ENST00000489230 C15orf61A6NNL5 157 aa9.71□□□□□ -0.86
COL4A5-206ENST00000489230 NUDT19A8MXV4 375 aa9.71□□□□□ -0.86
COL4A5-206ENST00000489230 SFT2D2O95562 160 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms