RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 AK6Q9Y3D8 172 aaKnown RBP11.79□□□□□ -0.52
USP48-210ENST00000489108 HSPG2P98160 4391 aa11.79□□□□□ -0.52
USP48-210ENST00000489108 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 DENRO43583 198 aaKnown RBP11.78□□□□□ -0.52
USP48-210ENST00000489108 UCHL1P09936 223 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 TFPI2P48307 235 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 RPL8P62917 257 aaKnown RBP11.78□□□□□ -0.52
USP48-210ENST00000489108 RAB11BQ15907 218 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 RAB3CQ96E17 227 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 C20orf24Q9BUV8 137 aa11.78□□□□□ -0.52
USP48-210ENST00000489108 RBMX2Q9Y388 322 aaKnown RBP11.78□□□□□ -0.52
USP48-210ENST00000489108 CA1P00915 261 aaPredicted RBP11.77□□□□□ -0.53
USP48-210ENST00000489108 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 GNB3P16520 340 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 HLA-GP17693 338 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 HLA-DMBP28068 263 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.53
USP48-210ENST00000489108 TMEM187Q14656 261 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 AHSA2Q719I0 299 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 OR4S2Q8NH73 311 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 CYGBQ8WWM9 190 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 HRH4Q9H3N8 390 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 PSORS1C1Q9UIG5 152 aa11.77□□□□□ -0.53
USP48-210ENST00000489108 A0A075B6Q4 140 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 TMEM272A0A1B0GTI8 110 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 K7EMT4 169 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 NDUFA4O00483 81 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 RBMY1A1P0DJD3 496 aaKnown RBP11.76□□□□□ -0.53
USP48-210ENST00000489108 RBMY1CP0DJD4 496 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 IRF3Q14653 427 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 RBMY1FQ15415 496 aaKnown RBP11.76□□□□□ -0.53
USP48-210ENST00000489108 LAIR2Q6ISS4 152 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 POM121L12Q8N7R1 296 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 VN1R17PQ8TDU5 208 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 TCTEX1D2Q8WW35 142 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 RNF2Q99496 336 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 CHRDL1Q9BU40 450 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 THYN1Q9P016 225 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 SMPXQ9UHP9 88 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 SPATA2Q9UM82 520 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 ETV7Q9Y603 341 aa11.76□□□□□ -0.53
USP48-210ENST00000489108 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 IGLC7A0M8Q6 106 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 HLA-DQB1P01920 261 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 CD36P16671 472 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 NFYAP23511 347 aaPredicted RBP11.75□□□□□ -0.53
USP48-210ENST00000489108 OR2B8PP59922 312 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 PVRIGQ6DKI7 326 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 Q6ZTC4 211 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 PQLC1Q8N2U9 271 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 Q8NAQ8 132 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 TMEM203Q969S6 136 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 GPHA2Q96T91 129 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 RAB22AQ9UL26 194 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
USP48-210ENST00000489108 IGKV1D-13A0A0B4J2D9 117 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 MFNGO00587 321 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 MRPS14O60783 128 aaKnown RBP11.74□□□□□ -0.53
USP48-210ENST00000489108 HRASP01112 189 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 IGKV1-13P0DP09 117 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
USP48-210ENST00000489108 TMEM91Q6ZNR0 172 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 Q6ZS49 121 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 MFSD4AQ8N468 514 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 GBGT1Q8N5D6 347 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 OR10R2Q8NGX6 335 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
USP48-210ENST00000489108 HSD17B10Q99714 261 aaKnown RBP11.74□□□□□ -0.53
USP48-210ENST00000489108 CENPOQ9BU64 300 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 S100A14Q9HCY8 104 aa11.74□□□□□ -0.53
USP48-210ENST00000489108 IGHV3-21A0A0B4J1V1 117 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 CHEK1O14757 476 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 SLC22A5O76082 557 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 TALDO1P37837 337 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 RHPN1-AS1Q9BWJ2 59 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 HRASLSQ9HDD0 168 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 BET1LQ9NYM9 111 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 TAS2R8Q9NYW2 309 aa11.73□□□□□ -0.53
USP48-210ENST00000489108 ELF5Q9UKW6 265 aaPredicted RBP11.73□□□□□ -0.53
USP48-210ENST00000489108 IGHV3-49A0A0A0MS15 119 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 TRAV3A0A0B4J244 114 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 C15orf61A6NNL5 157 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 P0DMU3 169 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 FAM231AP0DMU4 169 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 FAM231CP0DMU5 169 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 HIST1H1DP16402 221 aaKnown RBP11.72□□□□□ -0.53
USP48-210ENST00000489108 GADD45AP24522 165 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 SSX1Q16384 188 aa11.72□□□□□ -0.53
USP48-210ENST00000489108 LGALS9BQ3B8N2 356 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms