RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 FAM25AB3EWG3 89 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 FAM25CB3EWG5 89 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 FAM25GB3EWG6 89 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 REG1AP05451 166 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 RPA2P15927 270 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 CTRB1P17538 263 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 PSMB6P28072 239 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 RCVRNP35243 200 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 CTRB2Q6GPI1 263 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 COMMD9Q9P000 198 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 FBXL7Q9UJT9 491 aa19.06■□□□□ 0.64
HMGN1-217ENST00000489072 GPR31O00270 319 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 F2RP25116 425 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 GPR141Q7Z602 305 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 DMBX1Q8NFW5 382 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 AP3S1Q92572 193 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 ASCL2Q99929 193 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 DMRT1Q9Y5R6 373 aa19.05■□□□□ 0.64
HMGN1-217ENST00000489072 NDUFB8O95169 186 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 CSN3P07498 182 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 NHLRC4P0CG21 123 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-217ENST00000489072 TSPAN5P62079 268 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 KLK9Q2XQG4 91 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 ZNF585BQ52M93 769 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 RNASE12Q5GAN4 147 aaKnown RBP19.04■□□□□ 0.64
HMGN1-217ENST00000489072 CMTM1Q8IZ96 169 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 FCAMRQ8WWV6 532 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 DGCR14Q96DF8 476 aaKnown RBP19.04■□□□□ 0.64
HMGN1-217ENST00000489072 KLK9Q9UKQ9 250 aa19.04■□□□□ 0.64
HMGN1-217ENST00000489072 IGLC7A0M8Q6 106 aa19.03■□□□□ 0.64
HMGN1-217ENST00000489072 PPP5D1E7EU14 171 aa19.03■□□□□ 0.64
HMGN1-217ENST00000489072 LPAR6P43657 344 aa19.03■□□□□ 0.64
HMGN1-217ENST00000489072 PHLDA2Q53GA4 152 aa19.03■□□□□ 0.64
HMGN1-217ENST00000489072 EXTL2Q9UBQ6 330 aa19.03■□□□□ 0.64
HMGN1-217ENST00000489072 MARCH11A6NNE9 402 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 M0QYG6 137 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 SPCS2Q15005 226 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 TATDN3Q17R31 274 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 COMMD5Q9GZQ3 224 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 S4R3C0 116 aa19.02■□□□□ 0.64
HMGN1-217ENST00000489072 IGLV11-55A0A075B6I3 123 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 IGHV3-23P01764 117 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 FGF2P09038 288 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 ERVK-16P61578 105 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 OR52I2Q8NH67 350 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 CCDC140Q96MF4 163 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 ABHD1Q96SE0 405 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 MIXL1Q9H2W2 232 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 SIGLEC8Q9NYZ4 499 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 KLK11Q9UBX7 282 aa19.01■□□□□ 0.63
HMGN1-217ENST00000489072 HUWE1Q7Z6Z7 4374 aaKnown RBP19■□□□□ 0.63
HMGN1-217ENST00000489072 DHFRP00374 187 aa19■□□□□ 0.63
HMGN1-217ENST00000489072 KRASP01116 189 aa19■□□□□ 0.63
HMGN1-217ENST00000489072 HLA-AP01891 365 aaKnown RBP19■□□□□ 0.63
HMGN1-217ENST00000489072 Q8N1Y9 231 aa19■□□□□ 0.63
HMGN1-217ENST00000489072 OR10W1Q8NGF6 305 aa19■□□□□ 0.63
HMGN1-217ENST00000489072 QTRT1Q9BXR0 403 aaKnown RBP19■□□□□ 0.63
HMGN1-217ENST00000489072 TEX50A0A1B0GTY4 177 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 DEFA4P12838 97 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 HIST1H1BP16401 226 aaKnown RBP18.99■□□□□ 0.63
HMGN1-217ENST00000489072 G6PCP35575 357 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 UCP3P55916 312 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 LPCAT3Q6P1A2 487 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 ADAMTSL5Q6ZMM2 481 aa18.99■□□□□ 0.63
HMGN1-217ENST00000489072 SRSF8Q9BRL6 282 aaKnown RBP18.99■□□□□ 0.63
HMGN1-217ENST00000489072 FRMD6-AS1P0C7T7 363 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 FAM209BQ5JX69 171 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 CLEC19AQ6UXS0 136 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 TBC1D26Q86UD7 250 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 CLVS1Q8IUQ0 354 aaPredicted RBP18.98■□□□□ 0.63
HMGN1-217ENST00000489072 SBSPONQ8IVN8 264 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 PEMTQ9UBM1 199 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 NSG2Q9Y328 171 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 U3KQK5 164 aa18.98■□□□□ 0.63
HMGN1-217ENST00000489072 IZUMO1RA6ND01 250 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 MFSD2BA6NFX1 497 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 GGCTO75223 188 aaKnown RBP18.97■□□□□ 0.63
HMGN1-217ENST00000489072 OR2C1O95371 312 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 MECP2P51608 486 aaKnown RBP18.97■□□□□ 0.63
HMGN1-217ENST00000489072 SLC38A6Q8IZM9 456 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 CADM3Q8N126 398 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 EEF1AKMT3Q96AZ1 226 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 MTFP1Q9UDX5 166 aa18.97■□□□□ 0.63
HMGN1-217ENST00000489072 H0Y980 276 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 CTDSP2O14595 271 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 TPPPO94811 219 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 CD3DP04234 171 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 TRAPPC2P0DI81 140 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 TRAPPC2BP0DI82 140 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 EDN2P20800 178 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 ARL3P36405 182 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 WT1-ASQ06250 92 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 LAX1Q8IWV1 398 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 OR1L8Q8NGR8 309 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 WWC2-AS2Q96NR7 200 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 NDUFA4L2Q9NRX3 87 aa18.96■□□□□ 0.63
HMGN1-217ENST00000489072 FAM212BQ9NTI7 297 aaPredicted RBP18.96■□□□□ 0.63
HMGN1-217ENST00000489072 IGKV1-39P01597 117 aa18.95■□□□□ 0.62
HMGN1-217ENST00000489072 IGKV1D-39P04432 117 aa18.95■□□□□ 0.62
HMGN1-217ENST00000489072 S100GP29377 79 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms