RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 THOC7Q6I9Y2 204 aaKnown RBP12.53□□□□□ -0.4
HDAC7-224ENST00000488927 LFNGQ8NES3 379 aa12.53□□□□□ -0.4
HDAC7-224ENST00000488927 RNASE11Q8TAA1 199 aaKnown RBP12.53□□□□□ -0.4
HDAC7-224ENST00000488927 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
HDAC7-224ENST00000488927 TMEM56Q96MV1 263 aa12.53□□□□□ -0.4
HDAC7-224ENST00000488927 FAM103A1Q9BTL3 118 aaKnown RBP12.53□□□□□ -0.4
HDAC7-224ENST00000488927 TBC1D24Q9ULP9 559 aa12.53□□□□□ -0.4
HDAC7-224ENST00000488927 FBXO7Q9Y3I1 522 aa12.53□□□□□ -0.4
HDAC7-224ENST00000488927 TMEM56-RWDD3S4R434 201 aa12.53□□□□□ -0.4
HDAC7-224ENST00000488927 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 MSGN1A6NI15 193 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 SUPT4H1P63272 117 aaKnown RBP12.52□□□□□ -0.41
HDAC7-224ENST00000488927 CD83Q01151 205 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 SRSF4Q08170 494 aaKnown RBP12.52□□□□□ -0.41
HDAC7-224ENST00000488927 TMEM187Q14656 261 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 CXorf66Q5JRM2 361 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-224ENST00000488927 TMEM65Q6PI78 240 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 LGI3Q8N145 548 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 RNF152Q8N8N0 203 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 OR4A16Q8NH70 328 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 SRSF8Q9BRL6 282 aaKnown RBP12.52□□□□□ -0.41
HDAC7-224ENST00000488927 ZFP57Q9NU63 452 aa12.52□□□□□ -0.41
HDAC7-224ENST00000488927 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
HDAC7-224ENST00000488927 A0A1W2PN81 502 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 TCRBV4S1A1TA0A5B7 111 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 C15orf61A6NNL5 157 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 H3BUA1 57 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 IGLV1-40P01703 118 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 TCRBP04435 133 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 VAMP1P23763 118 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 PSMB8P28062 276 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 CHRNA7P36544 502 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 RAB25P57735 213 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 C10orf99Q6UWK7 81 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 NDUFA11Q86Y39 141 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
HDAC7-224ENST00000488927 C11orf44Q8N8P7 122 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 OR5B3Q8NH48 314 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 ALX4Q9H161 411 aaPredicted RBP12.51□□□□□ -0.41
HDAC7-224ENST00000488927 C20orf85Q9H1P6 137 aa12.51□□□□□ -0.41
HDAC7-224ENST00000488927 TRAV3A0A0B4J244 114 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 A0A0B4J2A0 478 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 DUXBA0A1W2PPF3 345 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 M0QZ24 198 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 RBMXL2O75526 392 aaKnown RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 BRI3O95415 125 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 SFT2D2O95562 160 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 IGKV1-5P01602 117 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 OR9G9P0C7N8 305 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 OR2B8PP59922 312 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 IFITM3Q01628 133 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 C2orf68Q2NKX9 166 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 HSD17B13Q7Z5P4 300 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 OR1L8Q8NGR8 309 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 LSM10Q969L4 123 aaKnown RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 CITED2Q99967 270 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 QTRT1Q9BXR0 403 aaKnown RBP12.5□□□□□ -0.41
HDAC7-224ENST00000488927 SLA2Q9H6Q3 261 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 TMEM14BQ9NUH8 114 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 CACFD1Q9UGQ2 172 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 SHPKQ9UHJ6 478 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 ZNF257Q9Y2Q1 563 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 OR51B2Q9Y5P1 312 aa12.5□□□□□ -0.41
HDAC7-224ENST00000488927 HLA-AP01891 365 aaKnown RBP12.49□□□□□ -0.41
HDAC7-224ENST00000488927 OR4E1P0C645 316 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 P0C879 139 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 TRAPPC2P0DI81 140 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 TRAPPC2BP0DI82 140 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 C4orf46Q504U0 113 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 TCTEX1D4Q5JR98 221 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 KHDC1LQ5JSQ8 128 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 C10orf55Q5SWW7 151 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 ZNF429Q86V71 674 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 MRPL41Q8IXM3 137 aaKnown RBP12.49□□□□□ -0.41
HDAC7-224ENST00000488927 TTC9CQ8N5M4 171 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 LRTM2Q8N967 370 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 FAM110DQ8TAY7 271 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-224ENST00000488927 NUDT15Q9NV35 164 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 FLVCR2Q9UPI3 526 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 DNHD1Q96M86 4753 aa12.49□□□□□ -0.41
HDAC7-224ENST00000488927 TEX50A0A1B0GTY4 177 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 TEX22C9J3V5 150 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 DHFRP00374 187 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 PF4V1P10720 104 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 RAB9AP51151 201 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 ASPHD1Q5U4P2 390 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 PDCD10Q9BUL8 212 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 PALMDQ9NP74 551 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 NDUFA4L2Q9NRX3 87 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 NSG2Q9Y328 171 aa12.48□□□□□ -0.41
HDAC7-224ENST00000488927 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
HDAC7-224ENST00000488927 NPIPB5A8MRT5 1133 aa12.47□□□□□ -0.41
HDAC7-224ENST00000488927 SOX15O60248 233 aa12.47□□□□□ -0.41
HDAC7-224ENST00000488927 RPLP1P05386 114 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms