RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TMED3Q9Y3Q3 217 aa9.76□□□□□ -0.85
TRAIP-209ENST00000488860 OR51B2Q9Y5P1 312 aa9.76□□□□□ -0.85
TRAIP-209ENST00000488860 hCG_2014768A0A024R1R8 64 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 C5orf51A6NDU8 294 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 MPTX1A8MV57 137 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 ATP6V0E1O15342 81 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 KCNAB3O43448 404 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 VDAC2P45880 294 aaPredicted RBP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 RPL27AP46776 148 aaKnown RBP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 RPL15P61313 204 aaKnown RBP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 CX3CL1P78423 397 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 SMCO1Q147U7 214 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 FXYD3Q14802 87 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 ECSCRQ19T08 205 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 SPINK9Q5DT21 86 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 Q6ZSV7 163 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 FYTTD1Q96QD9 318 aaKnown RBP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 SPIN2AQ99865 258 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 SPIN2BQ9BPZ2 258 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 COMMD5Q9GZQ3 224 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 MED28Q9H204 178 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 MGAT4CQ9UBM8 478 aa9.75□□□□□ -0.85
TRAIP-209ENST00000488860 NIPBLQ6KC79 2804 aaeCLIP9.75□□□□□ -0.85
TRAIP-209ENST00000488860 DBX1A6NMT0 343 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 ST8SIA3O43173 380 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 SIX6O95475 246 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 SCGB1D2O95969 90 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 IFNA17P01571 189 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 IL6RP08887 468 aaPredicted RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 APELAP0DMC3 54 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 MAS1LP35410 378 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 COMPP49747 757 aaPredicted RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 SSBP2P81877 361 aaPredicted RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 C2orf68Q2NKX9 166 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 IAH1Q2TAA2 248 aaPredicted RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 GSG1LQ6UXU4 331 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 Q6ZRM9 215 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 PRIMA1Q86XR5 153 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 FOXRED2Q8IWF2 684 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 SRSF12Q8WXF0 261 aaKnown RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 LINC00527Q9UJ94 153 aa9.74□□□□□ -0.85
TRAIP-209ENST00000488860 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
TRAIP-209ENST00000488860 A0A1B0GU03 582 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 IGHG2P01859 326 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 ZNF562Q6V9R5 426 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-209ENST00000488860 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 OR2T6Q8NHC8 308 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 NOL4LQ96MY1 436 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-209ENST00000488860 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.73□□□□□ -0.85
TRAIP-209ENST00000488860 TMEM14BQ9NUH8 114 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 GSKIPQ9P0R6 139 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
TRAIP-209ENST00000488860 TEX50A0A1B0GTY4 177 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 FGF2P09038 288 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 HOXA1P49639 335 aaPredicted RBP9.72□□□□□ -0.85
TRAIP-209ENST00000488860 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
TRAIP-209ENST00000488860 FCN2Q15485 313 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 UNQ5815/PRO19632Q6UWF5 114 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 Q6ZNX1 250 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 CADM3Q8N126 398 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 ZBTB8BQ8NAP8 495 aaPredicted RBP9.72□□□□□ -0.85
TRAIP-209ENST00000488860 OR5M8Q8NGP6 311 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 PLEKHA3Q9HB20 300 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 WSB1Q9Y6I7 421 aa9.72□□□□□ -0.85
TRAIP-209ENST00000488860 MSGN1A6NI15 193 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 E7EUB6 86 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 AP4M1O00189 453 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 TSPAN9O75954 239 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 NDUFA7O95182 113 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 REG1AP05451 166 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 TRAPPC2P0DI81 140 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 TRAPPC2BP0DI82 140 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 SLC25A6P12236 298 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 ZNF429Q86V71 674 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 LFNGQ8NES3 379 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 OR4F5Q8NH21 305 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 OR5B3Q8NH48 314 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 SGMS2Q8NHU3 365 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 C2orf50Q96LR7 162 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 ENY2Q9NPA8 101 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 COA4Q9NYJ1 87 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 ZNF257Q9Y2Q1 563 aa9.71□□□□□ -0.86
TRAIP-209ENST00000488860 NF1P21359 2839 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 TRAV41A0A0B4J266 112 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 A0A1B0GW64 132 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 A0A1W2PN81 502 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 CGB1A6NKQ9 187 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 TEX22C9J3V5 150 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 G3V318 75 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 WRBO00258 174 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 IAPPP10997 89 aa9.7□□□□□ -0.86
TRAIP-209ENST00000488860 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
TRAIP-209ENST00000488860 AREGP15514 252 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms