RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ATG5Q9H1Y0 275 aa14.16□□□□□ -0.14
GGPS1-206ENST00000488594 THYN1Q9P016 225 aa14.16□□□□□ -0.14
GGPS1-206ENST00000488594 IGKV1D-13A0A0B4J2D9 117 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 MFSD2BA6NFX1 497 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 IGKV1-13P0DP09 117 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 MYL9P24844 172 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 HACD4Q5VWC8 232 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 PLET1Q6UQ28 207 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 MFSD4AQ8N468 514 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 STPG3Q8N7X2 389 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 RNF183Q96D59 192 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 CCDC90BQ9GZT6 254 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 BET1LQ9NYM9 111 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 TAS2R8Q9NYW2 309 aa14.15□□□□□ -0.14
GGPS1-206ENST00000488594 TSPAN4O14817 238 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 GPR183P32249 361 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 BRWD1-AS2P59051 145 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 CDNFQ49AH0 187 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 SSX9Q7RTT3 188 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 PRSS48Q7RTY5 328 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 RPP25LQ8N5L8 163 aaKnown RBP14.14□□□□□ -0.15
GGPS1-206ENST00000488594 ZNF502Q8TBZ5 544 aa14.14□□□□□ -0.15
GGPS1-206ENST00000488594 SRSF8Q9BRL6 282 aaKnown RBP14.14□□□□□ -0.15
GGPS1-206ENST00000488594 ZNF436Q9C0F3 470 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-206ENST00000488594 ELF5Q9UKW6 265 aaPredicted RBP14.14□□□□□ -0.15
GGPS1-206ENST00000488594 REG1AP05451 166 aa14.13□□□□□ -0.15
GGPS1-206ENST00000488594 RAB3BP20337 219 aa14.13□□□□□ -0.15
GGPS1-206ENST00000488594 PTBP1P26599 531 aaKnown RBP eCLIP14.13□□□□□ -0.15
GGPS1-206ENST00000488594 LGALS9CQ6DKI2 356 aa14.13□□□□□ -0.15
GGPS1-206ENST00000488594 LAMTOR1Q6IAA8 161 aa14.13□□□□□ -0.15
GGPS1-206ENST00000488594 CGB1A6NKQ9 187 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 CYB5BO43169 146 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 MSMO1Q15800 293 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 TIMM50Q3ZCQ8 353 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 TMEM190Q8WZ59 177 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 HRASLSQ9HDD0 168 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 DAZ1Q9NQZ3 744 aaKnown RBP14.12□□□□□ -0.15
GGPS1-206ENST00000488594 UBQLN2Q9UHD9 624 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 ANXA10Q9UJ72 324 aa14.12□□□□□ -0.15
GGPS1-206ENST00000488594 SCGNO76038 276 aa14.11□□□□□ -0.15
GGPS1-206ENST00000488594 OR2B8PP59922 312 aa14.11□□□□□ -0.15
GGPS1-206ENST00000488594 VN1R17PQ8TDU5 208 aa14.11□□□□□ -0.15
GGPS1-206ENST00000488594 PHLDA1Q8WV24 401 aaPredicted RBP14.11□□□□□ -0.15
GGPS1-206ENST00000488594 FRAS1Q86XX4 4008 aa14.11□□□□□ -0.15
GGPS1-206ENST00000488594 IGHV3-35A0A0C4DH35 117 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 IGLC7A0M8Q6 106 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 OR4C46A6NHA9 309 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 RBFOX2O43251 390 aaKnown RBP eCLIP14.1□□□□□ -0.15
GGPS1-206ENST00000488594 TGOLN2O43493 480 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 FGF2P09038 288 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 GNG2P59768 71 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 ODF3L2Q3SX64 289 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 ZNF367Q7RTV3 350 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 NUDCD2Q8WVJ2 157 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 COMMD5Q9GZQ3 224 aa14.1□□□□□ -0.15
GGPS1-206ENST00000488594 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 TAS2R31P59538 309 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 TBCEQ15813 527 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 THOC7Q6I9Y2 204 aaKnown RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 SPAG16Q8N0X2 631 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 ZBTB34Q8NCN2 500 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 GALNT14Q96FL9 552 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 C6orf62Q9GZU0 229 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 MAP6D1Q9H9H5 199 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 NDUFB11Q9NX14 153 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 TMEM235A6NFC5 223 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 DEDDO75618 318 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 POU2AF1Q16633 256 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 SPSB3Q6PJ21 355 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 HSD17B13Q7Z5P4 300 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 BSCL2Q96G97 398 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 GPHA2Q96T91 129 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 ATP6V0BQ99437 205 aa14.09□□□□□ -0.15
GGPS1-206ENST00000488594 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
GGPS1-206ENST00000488594 NDUFA4O00483 81 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 UPK2O00526 184 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 TNFSF12O43508 249 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 NQO2P16083 231 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 RPL35AP18077 110 aaKnown RBP14.08□□□□□ -0.16
GGPS1-206ENST00000488594 CATR1Q13166 79 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 NR2C2APQ86WQ0 139 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 GDPD1Q8N9F7 314 aa14.08□□□□□ -0.16
GGPS1-206ENST00000488594 OR2T8A6NH00 312 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 K7EMT4 169 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 HPRT1P00492 218 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 AQP4P55087 323 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 ARPC4P59998 168 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 OR13F1Q8NGS4 319 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 SECTM1Q8WVN6 248 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 MFFQ9GZY8 342 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 CCL28Q9NRJ3 127 aa14.07□□□□□ -0.16
GGPS1-206ENST00000488594 NOTOA8MTQ0 251 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 SSX5O60225 188 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 FCGR2CP31995 323 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 C22orf42Q6IC83 251 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 CD300LFQ8TDQ1 290 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 GATAD1Q8WUU5 269 aa14.06□□□□□ -0.16
GGPS1-206ENST00000488594 KMT2AQ03164 3969 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 SULT1C2O00338 296 aa14.05□□□□□ -0.16
GGPS1-206ENST00000488594 RPA2P15927 270 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms