RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF818PQ6ZRF7 136 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 GTSCR1Q86UQ5 136 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 SAMD12Q8N8I0 201 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 OR5AP2Q8NGF4 316 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 DYNLRB2Q8TF09 96 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 S100A16Q96FQ6 103 aaKnown RBP8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 FANCD2OSQ96PS1 177 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 PLEKHA3Q9HB20 300 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 ZC4H2Q9NQZ6 224 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 EHFQ9NZC4 300 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 PTTG2Q9NZH5 202 aa8.57□□□□□ -1.04
NIPAL3-207ENST00000488155 CGB1A6NKQ9 187 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 S1PR2O95136 353 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 DEFA4P12838 97 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 ARL3P36405 182 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 CBX5P45973 191 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 TAS2R20P59543 309 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 GUCA2BQ16661 112 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 UBE2NLQ5JXB2 153 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 TMEM69Q5SWH9 247 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 CASC10Q5T4H9 136 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 Q8N402 240 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 ZBTB34Q8NCN2 500 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 DMBX1Q8NFW5 382 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 GIMAP1Q8WWP7 306 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 CACNG8Q8WXS5 425 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 KCTD12Q96CX2 325 aaKnown RBP8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 ZNF2Q9BSG1 426 aaPredicted RBP8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 THAP7Q9BT49 309 aaPredicted RBP8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 BET1LQ9NYM9 111 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 DMRT1Q9Y5R6 373 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
NIPAL3-207ENST00000488155 IGHV3-35A0A0C4DH35 117 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 ZNF320A2RRD8 509 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 C2orf70A6NJV1 201 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 UPK2O00526 184 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 GGCTO75223 188 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 HPRT1P00492 218 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CRYGCP07315 174 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CD7P09564 240 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 FOLR2P14207 255 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 NQO2P16083 231 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CTRB1P17538 263 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 GNRHRP30968 328 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 MECP2P51608 486 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 TAS2R31P59538 309 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CD81P60033 236 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 HAGHQ16775 308 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CTRB2Q6GPI1 263 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CROCCP3Q8IVE0 287 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 OR10W1Q8NGF6 305 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 MCFD2Q8NI22 146 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 DYNC2LI1Q8TCX1 351 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 EEF1AKMT3Q96AZ1 226 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 CCDC140Q96MF4 163 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 RETNQ9HD89 108 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 PALMDQ9NP74 551 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 TMEM140Q9NV12 185 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 GAR1Q9NY12 217 aaKnown RBP8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 STARD9Q9P2P6 4700 aa8.55□□□□□ -1.04
NIPAL3-207ENST00000488155 MFSD2BA6NFX1 497 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 ZNF785A8K8V0 405 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 A8MZ25 164 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 DHFRP00374 187 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 RLN1P04808 185 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 EIF4EP06730 217 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 LYL1P12980 280 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 HLA-DMAP28067 261 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 OR2B8PP59922 312 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 MSMO1Q15800 293 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 DEFB114Q30KQ6 69 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 DEFB125Q8N687 156 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 OR5H2Q8NGV7 314 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 OR4A5Q8NH83 315 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 AP3S1Q92572 193 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 WDR89Q96FK6 387 aaPredicted RBP8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 CITED4Q96RK1 184 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 TSC22D3Q99576 134 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 NEURL2Q9BR09 285 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 AIFM2Q9BRQ8 373 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 HINT2Q9BX68 163 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 COMMD5Q9GZQ3 224 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 CCDC59Q9P031 241 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 COMMD3Q9UBI1 195 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 NSG2Q9Y328 171 aa8.54□□□□□ -1.04
NIPAL3-207ENST00000488155 SACSQ9NZJ4 4579 aa8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 IGLV11-55A0A075B6I3 123 aa8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 IGHV3-21A0A0B4J1V1 117 aa8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 IGLC7A0M8Q6 106 aa8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 PGLYRP1O75594 196 aaPredicted RBP8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 CLEC3BP05452 202 aa8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 HIST1H1BP16401 226 aaKnown RBP8.53□□□□□ -1.04
NIPAL3-207ENST00000488155 PRSS3P35030 304 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms