RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NEIL1Q96FI4 390 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 MGST2Q99735 147 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 RPUSD1Q9UJJ7 312 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 TRAV38-1A0A0B4J264 116 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 CLN5O75503 358 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 MMP23AO75900 390 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 YIF1AO95070 293 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 HSPE1P61604 102 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 ADIPOQQ15848 244 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 NCMAPQ5T1S8 102 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 SLC25A48Q6ZT89 311 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 SLC16A13Q7RTY0 426 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 TP53TG5Q9Y2B4 290 aa14.76□□□□□ -0.05
PDLIM7-207ENST00000486828 TET2Q6N021 2002 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 A0A1W2PPV4 95 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 hADV38S2A0JD32 116 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 DPRXA6NFQ7 191 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 NKX6-3A6NJ46 265 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 HRASP01112 189 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 TRGC2P03986 189 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 CCL8P80075 99 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 NANPQ8TBE9 248 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 GGTLC1Q9BX51 225 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 DOK5Q9P104 306 aa14.75□□□□□ -0.05
PDLIM7-207ENST00000486828 TMEM8BA6NDV4 472 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 C17orf100A8MU93 164 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 C11orf94C9JXX5 98 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BKO60814 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BJP06899 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 OR4A8P0C604 315 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BOP23527 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BBP33778 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 NDUFA6P56556 154 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BDP58876 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BCP62807 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST2H2BEQ16778 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 C16orf82Q7Z2V1 217 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 CISD2Q8N5K1 135 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 SLC24A4Q8NFF2 622 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BHQ93079 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 SNRNP40Q96DI7 357 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BNQ99877 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 HIST1H2BMQ99879 126 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 LSM4Q9Y4Z0 139 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 LINC00312Q9Y6C7 94 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 PXMP4Q9Y6I8 212 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 DYSFO75923 2080 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 TMPRSS2O15393 492 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 NPY1RP25929 384 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 NPVFQ9HCQ7 196 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 ENY2Q9NPA8 101 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 KCNIP2Q9NS61 270 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 JKAMPQ9P055 326 aa14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 TLN1Q9Y490 2541 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-207ENST00000486828 THBDP07204 575 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 IL6RP08887 468 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 NDUFB7P17568 137 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 CDX1P47902 265 aaPredicted RBP14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 BSPH1Q075Z2 132 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 MIC13Q5XKP0 118 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 Q8NA96 180 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 PATZ1Q9HBE1 687 aaKnown RBP14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 PRNDQ9UKY0 176 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 ITPR1Q14643 2758 aa14.73□□□□□ -0.05
PDLIM7-207ENST00000486828 PDE6DO43924 150 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 CT45A6P0DMU7 189 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 CT45A5P0DMU8 189 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 CT45A7P0DMV0 189 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 TBR1Q16650 682 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 ARSJQ5FYB0 599 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 GFRALQ6UXV0 394 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 OR10A7Q8NGE5 316 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 C1orf159Q96HA4 380 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 OR51B2Q9Y5P1 312 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 VENTXO95231 258 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 CA2P00918 260 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 PFN1P07737 140 aaKnown RBP14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 SFTPCP11686 197 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 NPPCP23582 126 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 MEF2CQ06413 473 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 RTL8BQ17RB0 113 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 SSX8Q7RTT4 187 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 GAL3ST2Q9H3Q3 398 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 SLC35D1Q9NTN3 355 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 SLC25A10Q9UBX3 287 aaPredicted RBP14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 ZNF257Q9Y2Q1 563 aa14.72□□□□□ -0.05
PDLIM7-207ENST00000486828 UPK2O00526 184 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 STAG3L2P0CL84 134 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 STAG3L3P0CL85 134 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 PYGO2Q9BRQ0 406 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 SH3BGRL2Q9UJC5 107 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 ZNF835Q9Y2P0 537 aa14.71□□□□□ -0.05
PDLIM7-207ENST00000486828 H7BYZ3 331 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 RELQ04864 619 aaPredicted RBP14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 TEPPQ6URK8 271 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 SPNS3Q6ZMD2 512 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ABHD5Q8WTS1 349 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 FRZBQ92765 325 aa14.7□□□□□ -0.06
PDLIM7-207ENST00000486828 ANAPC16Q96DE5 110 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms