RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 BLVRAP53004 296 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 POLR2GP62487 172 aaKnown RBP eCLIP0.98□□□□□ -2.25
LTN1-206ENST00000486427 RSU1Q15404 277 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 C9orf64Q5T6V5 341 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 FAM27BQ5VT28 67 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 LRRN1Q6UXK5 716 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 HIST2H3AQ71DI3 136 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 PIGXQ8TBF5 258 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 OR8D2Q9GZM6 311 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 FKBP14Q9NWM8 211 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 NAT8Q9UHE5 227 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 TIMM22Q9Y584 194 aa0.98□□□□□ -2.25
LTN1-206ENST00000486427 ZFHX2Q9C0A1 2572 aaPredicted RBP0.98□□□□□ -2.25
LTN1-206ENST00000486427 C21orf140B9A014 251 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 M0QZ92 97 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 CETN3O15182 167 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 APOEP02649 317 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 OCM2P0CE71 109 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 MYL12AP19105 171 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 REG1BP48304 166 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 EVX1P49640 407 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 RAB13P51153 203 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 EMX1Q04741 257 aaPredicted RBP0.97□□□□□ -2.25
LTN1-206ENST00000486427 DMTNQ08495 405 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 C1orf195Q5TG92 126 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 FAM173BQ6P4H8 233 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 TMEM86AQ8N2M4 240 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 TBC1D19Q8N5T2 526 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 DEFB125Q8N687 156 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 ACOT12Q8WYK0 555 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 RSL24D1Q9UHA3 163 aaKnown RBP0.97□□□□□ -2.25
LTN1-206ENST00000486427 C3orf18Q9UK00 162 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 ATP6V1DQ9Y5K8 247 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 MYH11P35749 1972 aa0.97□□□□□ -2.25
LTN1-206ENST00000486427 CUL9Q8IWT3 2517 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 EIF4G1Q04637 1599 aaKnown RBP0.96□□□□□ -2.26
LTN1-206ENST00000486427 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 IBA57-AS1B1ANH7 110 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 H0Y980 276 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 RPSAP08865 295 aaKnown RBP0.96□□□□□ -2.26
LTN1-206ENST00000486427 MAP2K4P45985 399 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 HAAOP46952 286 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 CSN1S1P47710 185 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 FABP9Q0Z7S8 132 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 ELOBQ15370 118 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 BATFQ16520 125 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 OR1M1Q8NGA1 313 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 ANKRD7Q92527 254 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 ROPN1LQ96C74 230 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 DIRAS2Q96HU8 199 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 SOX21Q9Y651 276 aaPredicted RBP0.96□□□□□ -2.26
LTN1-206ENST00000486427 GLI3P10071 1580 aa0.96□□□□□ -2.26
LTN1-206ENST00000486427 GREB1Q4ZG55 1949 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 IGKV2-40A0A087WW87 121 aaPredicted RBP0.95□□□□□ -2.26
LTN1-206ENST00000486427 EVPLLA8MZ36 301 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 I3L521 148 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 SLC16A4O15374 487 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 ORC5O43913 435 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 IGKV2D-40P01614 121 aaPredicted RBP0.95□□□□□ -2.26
LTN1-206ENST00000486427 FAM228BP0C875 321 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 TRGC1P0CF51 173 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 HLA-DMBP28068 263 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 S100A7P31151 101 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 MAGEA2P43356 314 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 MARCKSL1P49006 195 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 OR4D2P58180 307 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 NAA20P61599 178 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 CLVS2Q5SYC1 327 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 Q8N2B8 174 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 GPR32P1Q8NGA4 272 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 TESCQ96BS2 214 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 ADAT1Q9BUB4 502 aaKnown RBP0.95□□□□□ -2.26
LTN1-206ENST00000486427 DRC3Q9H069 523 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 MED9Q9NWA0 146 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 USE1Q9NZ43 259 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 FUT9Q9Y231 359 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 DCCP43146 1447 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 KIF24Q5T7B8 1368 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 MAP3K5Q99683 1374 aa0.95□□□□□ -2.26
LTN1-206ENST00000486427 TRBV10-2A0A0K0K1G8 114 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 LRRN3E7EW58 273 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 DEXIO95424 95 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 IGHV3-7P01780 117 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 C1QAP02745 245 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 KRT7P08729 469 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 SRP19P09132 144 aaKnown RBP0.94□□□□□ -2.26
LTN1-206ENST00000486427 SULT1A3P0DMM9 295 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 SULT1A4P0DMN0 295 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 FGF6P10767 208 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 RPS12P25398 132 aaKnown RBP0.94□□□□□ -2.26
LTN1-206ENST00000486427 G6PCP35575 357 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 CAV1Q03135 178 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 OGFRL1Q5TC84 451 aaPredicted RBP0.94□□□□□ -2.26
LTN1-206ENST00000486427 SFXN4Q6P4A7 337 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 DCXRQ7Z4W1 244 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 RAB8BQ92930 207 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 FGFR1OP2Q9NVK5 253 aa0.94□□□□□ -2.26
LTN1-206ENST00000486427 PAQR5Q9NXK6 330 aaPredicted RBP0.94□□□□□ -2.26
LTN1-206ENST00000486427 LHFPL6Q9Y693 200 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms