RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PLSCR3Q9NRY6 295 aa4.46□□□□□ -1.7
COPS3-208ENST00000486032 TMEM140Q9NV12 185 aa4.46□□□□□ -1.7
COPS3-208ENST00000486032 IGHV7-81A0A0B4J1V7 117 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 A0A0G2JRQ6 117 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 FAM25EA8MYX2 175 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 CLDN34H7C241 214 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 M0QZK8 103 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 UPK2O00526 184 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 CCSO14618 274 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 EREGO14944 169 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 RBFOX2O43251 390 aaKnown RBP eCLIP4.45□□□□□ -1.7
COPS3-208ENST00000486032 FGF16O43320 207 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 ATG12O94817 140 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 KBTBD11O94819 623 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 NDUFA3O95167 84 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 SPDEFO95238 335 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 PTTG1O95997 202 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 DHFRP00374 187 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 IGKV1-5P01602 117 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 AMY1AP04745 511 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 UCP1P25874 307 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 MECP2P51608 486 aaKnown RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 UBE2KP61086 200 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 CX3CL1P78423 397 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 DHRS2Q13268 280 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 FXYD3Q14802 87 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 ECSCRQ19T08 205 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 ANKRD55Q3KP44 614 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 SPINK9Q5DT21 86 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 C10orf55Q5SWW7 151 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 HIST2H2BDQ6DRA6 164 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 LYZL2Q7Z4W2 148 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 PPP1R27Q86WC6 154 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 MMD2Q8IY49 270 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 PUSL1Q8N0Z8 303 aaKnown RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 FAM71E2Q8N5Q1 922 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 TCTEX1D1Q8N7M0 179 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 SLC35G3Q8N808 338 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 TEX45Q8NA69 505 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 SYT8Q8NBV8 401 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 DUSP18Q8NEJ0 188 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 OR8H1Q8NGG4 311 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 OR4A16Q8NH70 328 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 OR2T6Q8NHC8 308 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 COQ8AQ8NI60 647 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 VSTM2AQ8TAG5 236 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 GLYATL2Q8WU03 294 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 RBPMSQ93062 196 aaKnown RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 GPR146Q96CH1 333 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 WDR89Q96FK6 387 aaPredicted RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 AIFM2Q9BRQ8 373 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 TMEM222Q9H0R3 208 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 ZNF430Q9H8G1 570 aaPredicted RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 ZNF702PQ9H963 129 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 PLEKHA2Q9HB19 425 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 GPN1Q9HCN4 374 aaPredicted RBP4.45□□□□□ -1.7
COPS3-208ENST00000486032 PALMDQ9NP74 551 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 COMMD9Q9P000 198 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 WSB1Q9Y6I7 421 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 ATRQ13535 2644 aa4.45□□□□□ -1.7
COPS3-208ENST00000486032 C13orf42A0A1B0GVH6 325 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 HMX3A6NHT5 357 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 G3V318 75 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 ATP6V0E1O15342 81 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 SSNA1O43805 119 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 CREBL2O60519 120 aaPredicted RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 ADAP1O75689 374 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 B3GALNT1O75752 331 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 CDS2O95674 445 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 SCGB1D2O95969 90 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 REG1AP05451 166 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 CRYGBP07316 175 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 HKR1P10072 659 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 RPL27AP46776 148 aaKnown RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 RPL8P62917 257 aaKnown RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 SRPXP78539 464 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 NDPQ00604 133 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 PRSS8Q16651 343 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 GGNBP1Q5YKI7 109 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 THOC7Q6I9Y2 204 aaKnown RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 UNQ5815/PRO19632Q6UWF5 114 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 CENPVQ7Z7K6 275 aaPredicted RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 ZNF329Q86UD4 541 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 FOXRED2Q8IWF2 684 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 C12orf45Q8N5I9 185 aaPredicted RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 C11orf44Q8N8P7 122 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR5T1Q8NG75 326 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR4F5Q8NH21 305 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR4A5Q8NH83 315 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 OR1S1Q8NH92 325 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 TMEM167AQ8TBQ9 72 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 ZNF431Q8TF32 576 aaPredicted RBP4.44□□□□□ -1.7
COPS3-208ENST00000486032 ARPC1AQ92747 370 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 GALNT14Q96FL9 552 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 SEC22AQ96IW7 307 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 PDCD10Q9BUL8 212 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 C19orf24Q9BVV8 132 aa4.44□□□□□ -1.7
COPS3-208ENST00000486032 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms