RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 ZNF257Q9Y2Q1 563 aa13.51□□□□□ -0.25
COL6A1-204ENST00000486023 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 M0QYG6 137 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 GPR31O00270 319 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 NDUFB8O95169 186 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 KRASP01116 189 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 HLA-AP01891 365 aaKnown RBP13.5□□□□□ -0.25
COL6A1-204ENST00000486023 PSMB6P28072 239 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 CLVS1Q8IUQ0 354 aaPredicted RBP13.5□□□□□ -0.25
COL6A1-204ENST00000486023 HINT2Q9BX68 163 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
COL6A1-204ENST00000486023 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 BMPR1BO00238 502 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 RGS5O15539 181 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 DHFRP00374 187 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 F2RP25116 425 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 RCVRNP35243 200 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 FCAMRQ8WWV6 532 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 DGCR14Q96DF8 476 aaKnown RBP13.49□□□□□ -0.25
COL6A1-204ENST00000486023 NSG2Q9Y328 171 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 TNCP24821 2201 aa13.49□□□□□ -0.25
COL6A1-204ENST00000486023 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
COL6A1-204ENST00000486023 IFNA6P05013 189 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 S100GP29377 79 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 G6PCP35575 357 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 OR2B8PP59922 312 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 OR10W1Q8NGF6 305 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 ZC4H2Q9NQZ6 224 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 KLK11Q9UBX7 282 aa13.48□□□□□ -0.25
COL6A1-204ENST00000486023 CGB1A6NKQ9 187 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 OR2C1O95371 312 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 IGLV1-51P01701 117 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 ALDH3B2P48448 385 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 SPCS2Q15005 226 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 LPCAT3Q6P1A2 487 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 TBC1D26Q86UD7 250 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 OR52I2Q8NH67 350 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 FANCD2OSQ96PS1 177 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 COMMD9Q9P000 198 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 PEMTQ9UBM1 199 aa13.47□□□□□ -0.25
COL6A1-204ENST00000486023 TEX50A0A1B0GTY4 177 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 MARCH11A6NNE9 402 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 CRYGCP07315 174 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 CSN3P07498 182 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.25
COL6A1-204ENST00000486023 PGAM2P15259 253 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 CTRB1P17538 263 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 POU2AF1Q16633 256 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 CTRB2Q6GPI1 263 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 IL34Q6ZMJ4 242 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 EEF1AKMT3Q96AZ1 226 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 QTRT1Q9BXR0 403 aaKnown RBP13.46□□□□□ -0.25
COL6A1-204ENST00000486023 SELENOKQ9Y6D0 94 aa13.46□□□□□ -0.25
COL6A1-204ENST00000486023 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 CTDSP2O14595 271 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 GGCTO75223 188 aaKnown RBP13.45□□□□□ -0.26
COL6A1-204ENST00000486023 SNAPC5O75971 98 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 CD3DP04234 171 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 TRAPPC2P0DI81 140 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 TRAPPC2BP0DI82 140 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 OR13C7P0DN81 318 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 ARL3P36405 182 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 ZNF585BQ52M93 769 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 RNASE10Q5GAN6 216 aaKnown RBP13.45□□□□□ -0.26
COL6A1-204ENST00000486023 ABHD1Q96SE0 405 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 OR51B2Q9Y5P1 312 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 U3KQK5 164 aa13.45□□□□□ -0.26
COL6A1-204ENST00000486023 IGLC7A0M8Q6 106 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 H0Y980 276 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 FRMD6-AS1P0C7T7 363 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 HIST1H1BP16401 226 aaKnown RBP13.44□□□□□ -0.26
COL6A1-204ENST00000486023 PI3P19957 117 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 MECP2P51608 486 aaKnown RBP13.44□□□□□ -0.26
COL6A1-204ENST00000486023 SLC25A24Q6NUK1 477 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 SBSPONQ8IVN8 264 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 LAX1Q8IWV1 398 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 SLC38A6Q8IZM9 456 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 OR1L8Q8NGR8 309 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 MIXL1Q9H2W2 232 aa13.44□□□□□ -0.26
COL6A1-204ENST00000486023 IGHV3-21A0A0B4J1V1 117 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 IZUMO1RA6ND01 250 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 MFSD2BA6NFX1 497 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 CLEC3BP05452 202 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 EDN2P20800 178 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 SCGB2B2Q4G0G5 96 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 DYNLRB2Q8TF09 96 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 CCDC140Q96MF4 163 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 SORL1Q92673 2214 aa13.43□□□□□ -0.26
COL6A1-204ENST00000486023 IGLV11-55A0A075B6I3 123 aa13.42□□□□□ -0.26
COL6A1-204ENST00000486023 PPP5CP53041 499 aa13.42□□□□□ -0.26
COL6A1-204ENST00000486023 SGPP2Q8IWX5 399 aa13.42□□□□□ -0.26
COL6A1-204ENST00000486023 OR4D10Q8NGI6 311 aa13.42□□□□□ -0.26
COL6A1-204ENST00000486023 MTFP1Q9UDX5 166 aa13.42□□□□□ -0.26
COL6A1-204ENST00000486023 IGHV3-35A0A0C4DH35 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms