RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 PPBPP02775 128 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 SERPINA7P05543 415 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 ZNF705DP0CH99 300 aaPredicted RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 ZNF705BP0CI00 300 aaPredicted RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 UCHL3P15374 230 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 MSNP26038 577 aaKnown RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 HAAOP46952 286 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 CSN1S1P47710 185 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 MARCKSL1P49006 195 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 AP2S1P53680 142 aaPredicted RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 AQP4P55087 323 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 TCL1AP56279 114 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 OR4D2P58180 307 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 POLR2GP62487 172 aaKnown RBP eCLIP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 FAM201AQ5SY85 155 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 SLC36A1Q7Z2H8 476 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 RPP25LQ8N5L8 163 aaKnown RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 ACOT12Q8WYK0 555 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 HSPB9Q9BQS6 159 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 MRPL32Q9BYC8 188 aaKnown RBP0.87□□□□□ -2.27
GCFC2-209ENST00000486016 CHST6Q9GZX3 395 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 ANGPT4Q9Y264 503 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 TIMM22Q9Y584 194 aa0.87□□□□□ -2.27
GCFC2-209ENST00000486016 INMT-MINDY4F8WBC2 141 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 CIAO1O76071 339 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 KRT7P08729 469 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 SRP19P09132 144 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 KCNE1P15382 129 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 HLA-DMBP28068 263 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 S100A7P31151 101 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 MAGEA12P43365 314 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 RAB5BP61020 215 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 MAGOHP61326 146 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 HIST1H4AP62805 103 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 COQ5Q5HYK3 327 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 C9orf64Q5T6V5 341 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 Q6ZSA8 131 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 DYNAPQ8N1N2 210 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 OR1M1Q8NGA1 313 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 OR51D1Q8NGF3 324 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 ROPN1LQ96C74 230 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 OPTNQ96CV9 577 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 CNBD2Q96M20 576 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 NAA38Q9BRA0 125 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 OR8D2Q9GZM6 311 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 FAM96AQ9H5X1 160 aa0.86□□□□□ -2.27
GCFC2-209ENST00000486016 PAQR5Q9NXK6 330 aaPredicted RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 RSL24D1Q9UHA3 163 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 NOSIPQ9Y314 301 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 SCAF11Q99590 1463 aaKnown RBP0.86□□□□□ -2.27
GCFC2-209ENST00000486016 NUMA1Q14980 2115 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 IGKV2-29A2NJV5 120 aaPredicted RBP0.85□□□□□ -2.27
GCFC2-209ENST00000486016 TRAPPC2LH3BP13 241 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 DCTN3O75935 186 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 CALB1P05937 261 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 MSMBP08118 114 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 FAM228BP0C875 321 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 GPX2P18283 190 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 DCCP43146 1447 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 EVX1P49640 407 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 CAV1Q03135 178 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 FAM27BQ5VT28 67 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 MALRD1Q5VYJ5 2156 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 ALKAL1Q6UXT8 129 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 C7orf65Q6ZTY9 151 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 IQCF2Q8IXL9 164 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 DEFB119Q8N690 84 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 ZNF676Q8N7Q3 588 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 OR5B17Q8NGF7 314 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 OR2T4Q8NH00 348 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 ANKRD7Q92527 254 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 Q96M85 177 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 ERMAPQ96PL5 475 aaPredicted RBP0.85□□□□□ -2.27
GCFC2-209ENST00000486016 MRPS26Q9BYN8 205 aaKnown RBP0.85□□□□□ -2.27
GCFC2-209ENST00000486016 FUT9Q9Y231 359 aa0.85□□□□□ -2.27
GCFC2-209ENST00000486016 CUL9Q8IWT3 2517 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 CPAMD8Q8IZJ3 1885 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 PTPRSQ13332 1948 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 MEIKINA0A087WXM9 373 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 TRBV6-5A0A0K0K1A5 114 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 MEIS3P1A6NDR6 274 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 GGT3PA6NGU5 568 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 OR51F1A6NGY5 319 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 ORC5O43913 435 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 NIPSNAP2O75323 286 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 IFNA5P01569 189 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 IGHV3-7P01780 117 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 TRGC1P0CF51 173 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 SULT1A3P0DMM9 295 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 SULT1A4P0DMN0 295 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 FGF6P10767 208 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 AKR1C3P42330 323 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 NKX2-5P52952 324 aaPredicted RBP0.84□□□□□ -2.27
GCFC2-209ENST00000486016 PMAIP1Q13794 54 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 MOGQ16653 247 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 GUK1Q16774 197 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 LPCAT4Q643R3 524 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 GLT8D1Q68CQ7 371 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 TMEM86AQ8N2M4 240 aa0.84□□□□□ -2.27
GCFC2-209ENST00000486016 C9orf163Q8N9P6 203 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms