RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 ZNF436Q9C0F3 470 aaPredicted RBP4.67□□□□□ -1.66
SMC4-217ENST00000485867 RIBC2Q9H4K1 309 aa4.67□□□□□ -1.66
SMC4-217ENST00000485867 ZNF430Q9H8G1 570 aaPredicted RBP4.67□□□□□ -1.66
SMC4-217ENST00000485867 ZNF221Q9UK13 617 aa4.67□□□□□ -1.66
SMC4-217ENST00000485867 TRBV7-1A0A0A6YYK4 115 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 MFSD2BA6NFX1 497 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 NPIPB5A8MRT5 1133 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 TEX22C9J3V5 150 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 DYNC1I1O14576 645 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 MRPS14O60783 128 aaKnown RBP4.66□□□□□ -1.66
SMC4-217ENST00000485867 CLEC3BP05452 202 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 CD2P06729 351 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 GPR183P32249 361 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 CEACAM6P40199 344 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 CMC4P56277 68 aaPredicted RBP4.66□□□□□ -1.66
SMC4-217ENST00000485867 KLK9Q2XQG4 91 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 GLIPR1L1Q6UWM5 242 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 MOB1BQ7L9L4 216 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.66□□□□□ -1.66
SMC4-217ENST00000485867 CANT1Q8WVQ1 401 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 MUL1Q969V5 352 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 ORAI1Q96D31 301 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 DAZ1Q9NQZ3 744 aaKnown RBP4.66□□□□□ -1.66
SMC4-217ENST00000485867 KLK9Q9UKQ9 250 aa4.66□□□□□ -1.66
SMC4-217ENST00000485867 NBDYA0A0U1RRE5 68 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 CRTAPO75718 401 aaPredicted RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 ACTL6BO94805 426 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 NAPSAO96009 420 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 FGF2P09038 288 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 SAA1P0DJI8 122 aaPredicted RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 RPA2P15927 270 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 IGFBP3P17936 291 aaPredicted RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 ZBTB25P24278 435 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 TFPI2P48307 235 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 XGP55808 180 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 SNRPGP62308 76 aaKnown RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 RPS27AP62979 156 aaKnown RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 CBX3Q13185 183 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 CDK10Q15131 360 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 RTL8BQ17RB0 113 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 LIPKQ5VXJ0 399 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 MORN3Q6PF18 240 aaPredicted RBP4.65□□□□□ -1.67
SMC4-217ENST00000485867 MMD2Q8IY49 270 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 SYS1Q8N2H4 156 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 ACBD7Q8N6N7 88 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 OR8J1Q8NGP2 316 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 ZNF502Q8TBZ5 544 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 NRBF2Q96F24 287 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 C5orf30Q96GV9 206 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 FAM210BQ96KR6 192 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 NICN1Q9BSH3 213 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 RNF167Q9H6Y7 350 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 SLC2A9Q9NRM0 540 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 TAGLN3Q9UI15 199 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 ETV7Q9Y603 341 aa4.65□□□□□ -1.67
SMC4-217ENST00000485867 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 IGHV3OR16-8A0A075B7F1 116 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 A0A1B0GW64 132 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 DPPA5A6NC42 116 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 E7EUB6 86 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 ZNF207O43670 478 aaKnown RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 CREBL2O60519 120 aaPredicted RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 CRYZL1O95825 349 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 CRYGCP07315 174 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 RRASP10301 218 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 AREGP15514 252 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 HIST1H1BP16401 226 aaKnown RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 C4BPBP20851 252 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 NPY1RP25929 384 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 FAM3BP58499 235 aaPredicted RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 HLA-DRB3P79483 266 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 IRF3Q14653 427 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 TMEM41BQ5BJD5 291 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 SERTAD4-AS1Q5TG53 156 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 PLET1Q6UQ28 207 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 SSX9Q7RTT3 188 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 C6orf201Q7Z4U5 140 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 SETD6Q8TBK2 473 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 GPR148Q8TDV2 347 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 CCDC124Q96CT7 223 aaKnown RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 MRPL48Q96GC5 212 aaKnown RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 CXorf58Q96LI9 332 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 NEDD4LQ96PU5 975 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 RNF2Q99496 336 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 FAAP24Q9BTP7 215 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 THTPAQ9BU02 230 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 CHMP1AQ9HD42 196 aaPredicted RBP4.64□□□□□ -1.67
SMC4-217ENST00000485867 SDHAF2Q9NX18 166 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 MDFICQ9P1T7 246 aa4.64□□□□□ -1.67
SMC4-217ENST00000485867 IGKV3-7A0A075B6H7 116 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 TRAV8-7A0A075B6U6 113 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 TRBV6-6A0A0A6YYG2 114 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 IGKV1-6A0A0C4DH72 117 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 K7EMT4 169 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 TGOLN2O43493 480 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 DHFRP00374 187 aa4.63□□□□□ -1.67
SMC4-217ENST00000485867 POLR2IP36954 125 aaKnown RBP4.63□□□□□ -1.67
SMC4-217ENST00000485867 RPL27AP46776 148 aaKnown RBP4.63□□□□□ -1.67
SMC4-217ENST00000485867 GTF2A1P52655 376 aaPredicted RBP4.63□□□□□ -1.67
SMC4-217ENST00000485867 GBX2P52951 348 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms