RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 OR10C1Q96KK4 312 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 SPIN2AQ99865 258 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 SPIN2BQ9BPZ2 258 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 QTRT1Q9BXR0 403 aaKnown RBP13.9□□□□□ -0.18
CHMP3-207ENST00000485465 MED28Q9H204 178 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 ZNF702PQ9H963 129 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 COA4Q9NYJ1 87 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
CHMP3-207ENST00000485465 NIPBLQ6KC79 2804 aaeCLIP13.9□□□□□ -0.18
CHMP3-207ENST00000485465 TEX50A0A1B0GTY4 177 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 C13orf42A0A1B0GVH6 325 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 C5orf51A6NDU8 294 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 LINC01548A6NM66 108 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 FAM25EA8MYX2 175 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 PITX3O75364 302 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 NDPQ00604 133 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 AARDQ4LEZ3 155 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 C10orf55Q5SWW7 151 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 GSG1LQ6UXU4 331 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 SLC35E3Q7Z769 313 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 ZNF429Q86V71 674 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 LURAP1LQ8IV03 231 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 Q8N2B8 174 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 COMMD5Q9GZQ3 224 aa13.89□□□□□ -0.19
CHMP3-207ENST00000485465 ST8SIA3O43173 380 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 KCNAB3O43448 404 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 TSPAN9O75954 239 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OPN1MWP04001 364 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 RPL27AP46776 148 aaKnown RBP13.88□□□□□ -0.19
CHMP3-207ENST00000485465 RRAS2P62070 204 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-207ENST00000485465 FCN2Q15485 313 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-207ENST00000485465 Q6ZSV7 163 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OR5M8Q8NGP6 311 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OR5B3Q8NH48 314 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 OR1S1Q8NH92 325 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 SRSF12Q8WXF0 261 aaKnown RBP13.88□□□□□ -0.19
CHMP3-207ENST00000485465 ARPC1AQ92747 370 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 TAF15Q92804 592 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHMP3-207ENST00000485465 MGAT4CQ9UBM8 478 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 ZNF257Q9Y2Q1 563 aa13.88□□□□□ -0.19
CHMP3-207ENST00000485465 E7EUB6 86 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 SIX6O95475 246 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 EGR2P11161 476 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-207ENST00000485465 HSPE1P61604 102 aaKnown RBP13.87□□□□□ -0.19
CHMP3-207ENST00000485465 ZBTB8BQ8NAP8 495 aaPredicted RBP13.87□□□□□ -0.19
CHMP3-207ENST00000485465 OR52E5Q8NH55 327 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 GRPEL2Q8TAA5 225 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 C2orf50Q96LR7 162 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 PARP11Q9NR21 331 aa13.87□□□□□ -0.19
CHMP3-207ENST00000485465 A0A1B0GW64 132 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 MSGN1A6NI15 193 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 CGB1A6NKQ9 187 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 NDUFA7O95182 113 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 IFNA17P01571 189 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 ARSJQ5FYB0 599 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-207ENST00000485465 PRIMA1Q86XR5 153 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 OR4D5Q8NGN0 318 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 FYTTD1Q96QD9 318 aaKnown RBP13.86□□□□□ -0.19
CHMP3-207ENST00000485465 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
CHMP3-207ENST00000485465 PDCD10Q9BUL8 212 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 C16orf95Q9H693 158 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 NDUFA4L2Q9NRX3 87 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 GSKIPQ9P0R6 139 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 CACFD1Q9UGQ2 172 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 FBXO7Q9Y3I1 522 aa13.86□□□□□ -0.19
CHMP3-207ENST00000485465 TEX22C9J3V5 150 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 NXPH3O95157 252 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 IGF1P05019 195 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 TRAPPC2P0DI81 140 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 TRAPPC2BP0DI82 140 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 CXCL3P19876 107 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 H2BFSP57053 126 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 SPCS3P61009 180 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 PDLIM3Q53GG5 364 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-207ENST00000485465 CXorf66Q5JRM2 361 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-207ENST00000485465 OR11H7Q8NGC8 314 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 OR2T6Q8NHC8 308 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 SGMS2Q8NHU3 365 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 HINT2Q9BX68 163 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 HSPB7Q9UBY9 170 aa13.85□□□□□ -0.19
CHMP3-207ENST00000485465 FAM90A26D6RGX4 464 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 AP4M1O00189 453 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 VDAC2P45880 294 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-207ENST00000485465 CRIP2P52943 208 aaPredicted RBP13.84□□□□□ -0.19
CHMP3-207ENST00000485465 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 TNFRSF9Q07011 255 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 TMEM95Q3KNT9 176 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 SPINK9Q5DT21 86 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 LINC00527Q9UJ94 153 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 ZNF580Q9UK33 172 aa13.84□□□□□ -0.19
CHMP3-207ENST00000485465 A0A1B0GVG6 124 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 HMX3A6NHT5 357 aa13.83□□□□□ -0.2
CHMP3-207ENST00000485465 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-207ENST00000485465 ID3Q02535 119 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms