RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 FAM223BA6NKX1 122 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 MARCH11A6NNE9 402 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 KRASP01116 189 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 CD3DP04234 171 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 PSMB6P28072 239 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 G6PCP35575 357 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 OR2B8PP59922 312 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 ERVK-16P61578 105 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 RPEL1Q2QD12 228 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 C15orf32Q32M92 178 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 ZNF585BQ52M93 769 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 TBC1D26Q86UD7 250 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 SLC25A42Q86VD7 318 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 FAM223AQ8IWN6 122 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 CD300LFQ8TDQ1 290 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 DGCR14Q96DF8 476 aaKnown RBP9.4□□□□□ -0.9
MSH5-216ENST00000484309 AIFM2Q9BRQ8 373 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 ELOVL1Q9BW60 279 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 COMMD5Q9GZQ3 224 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 COMMD9Q9P000 198 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 FBXL7Q9UJT9 491 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 NSG2Q9Y328 171 aa9.4□□□□□ -0.9
MSH5-216ENST00000484309 LSM4Q9Y4Z0 139 aaKnown RBP9.4□□□□□ -0.9
MSH5-216ENST00000484309 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.91
MSH5-216ENST00000484309 NPIPB5A8MRT5 1133 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 BMPR1BO00238 502 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 NDUFB8O95169 186 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 PGAM2P15259 253 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 PI3P19957 117 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 RPL5P46777 297 aaKnown RBP9.39□□□□□ -0.91
MSH5-216ENST00000484309 PPP5CP53041 499 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 TMBIM6P55061 237 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 KLF5Q13887 457 aaPredicted RBP9.39□□□□□ -0.91
MSH5-216ENST00000484309 RNASE10Q5GAN6 216 aaKnown RBP9.39□□□□□ -0.91
MSH5-216ENST00000484309 VAX1Q5SQQ9 334 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 NECAP1Q8NC96 275 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 OR10W1Q8NGF6 305 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 OR4D10Q8NGI6 311 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 OR6Q1Q8NGQ2 317 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 DYNC2LI1Q8TCX1 351 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 FANCD2OSQ96PS1 177 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 B9D2Q9BPU9 175 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 HINT2Q9BX68 163 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 MTFP1Q9UDX5 166 aa9.39□□□□□ -0.91
MSH5-216ENST00000484309 IGLC7A0M8Q6 106 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 H3BMQ9 156 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
MSH5-216ENST00000484309 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
MSH5-216ENST00000484309 IFNA6P05013 189 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 DEFA4P12838 97 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 GP9P14770 177 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 CTRB1P17538 263 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 CTRB2Q6GPI1 263 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 FAAP20Q6NZ36 180 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 SLC38A6Q8IZM9 456 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 OR9G4Q8NGQ1 327 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 ISOC1Q96CN7 298 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 ASCL2Q99929 193 aa9.38□□□□□ -0.91
MSH5-216ENST00000484309 C6orf62Q9GZU0 229 aaPredicted RBP9.38□□□□□ -0.91
MSH5-216ENST00000484309 CCDC59Q9P031 241 aaKnown RBP9.38□□□□□ -0.91
MSH5-216ENST00000484309 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.37□□□□□ -0.91
MSH5-216ENST00000484309 TEX50A0A1B0GTY4 177 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 MFSD2BA6NFX1 497 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 CRYGCP07315 174 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 S100GP29377 79 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 UCP3P55916 312 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
MSH5-216ENST00000484309 IL18Q14116 193 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 CLEC19AQ6UXS0 136 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 IL34Q6ZMJ4 242 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 CCDC140Q96MF4 163 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 QTRT1Q9BXR0 403 aaKnown RBP9.37□□□□□ -0.91
MSH5-216ENST00000484309 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
MSH5-216ENST00000484309 IGLV11-55A0A075B6I3 123 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 DBX1A6NMT0 343 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 GABARAPH6UMI1 98 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 RAB3DO95716 219 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 DHFRP00374 187 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 IGKV1-39P01597 117 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 IGLV1-51P01701 117 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 IGKV1D-39P04432 117 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 TRAPPC2P0DI81 140 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 TRAPPC2BP0DI82 140 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 OR13C7P0DN81 318 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 EDN2P20800 178 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 TAS2R19P59542 299 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 WT1-ASQ06250 92 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 ARRDC1Q8N5I2 433 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 TMEM229BQ8NBD8 167 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 C15orf40Q8WUR7 153 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 BCL7BQ9BQE9 202 aa9.36□□□□□ -0.91
MSH5-216ENST00000484309 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms