RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CT45A1Q5HYN5 189 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 FAM74A1Q5RGS3 127 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM200BQ69YZ2 307 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SLC25A24Q6NUK1 477 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SLC25A48Q6ZT89 311 aaKnown RBP5.63□□□□□ -1.51
BRCA1-216ENST00000484087 TCF23Q7RTU1 214 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 OR1S2Q8NGQ3 325 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 OR4A16Q8NH70 328 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 CT45A3Q8NHU0 189 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 LEAP2Q969E1 77 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SAT2Q96F10 170 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-216ENST00000484087 C5orf30Q96GV9 206 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 SMIM8Q96KF7 97 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 PCGF1Q9BSM1 259 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 TNFRSF19Q9NS68 423 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 C19orf12Q9NSK7 152 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 PSENENQ9NZ42 101 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 AUP1Q9Y679 476 aa5.63□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PRD5 423 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PRF3 423 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PRM7 423 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 CEBPZOSA8MTT3 80 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF705EA8MWA4 302 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-216ENST00000484087 SLC31A2O15432 143 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 TCF21O43680 179 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 IFNA5P01569 189 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 APOA2P02652 100 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 CCL3L1P16619 93 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 SULT1A1P50225 295 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 RAB5CP51148 216 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 UBE2KP61086 200 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 SUMO1P63165 101 aaKnown RBP5.62□□□□□ -1.51
BRCA1-216ENST00000484087 NHLH2Q02577 135 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 TNFRSF9Q07011 255 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 KLRD1Q13241 179 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 CLINT1Q14677 625 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 NCR3LG1Q68D85 454 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 DHRS7BQ6IAN0 325 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-216ENST00000484087 FAM71F2Q6NXP2 309 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 Q6ZRM9 215 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 PNKDQ8N490 385 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 SIGLECL1Q8N7X8 197 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 C8orf31Q8N9H6 132 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF439Q8NDP4 499 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 OR5C1Q8NGR4 320 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 OR10X1Q8NGY0 326 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 CXorf58Q96LI9 332 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 TSNAXQ99598 290 aaKnown RBP5.62□□□□□ -1.51
BRCA1-216ENST00000484087 GINS3Q9BRX5 216 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 C11orf1Q9H5F2 150 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 HSPB7Q9UBY9 170 aa5.62□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1W2PPE3 182 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 IGSF23A1L1A6 192 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 FGF16O43320 207 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 TXNL1O43396 289 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 CST7O76096 145 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 CRYZL1O95825 349 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 IFNA17P01571 189 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 PRH1P02810 166 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 P0C879 139 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 IAPPP10997 89 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 PAX6P26367 422 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 SULT1A2P50226 295 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 DYNLT3P51808 116 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 PRRX1P54821 245 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 ERVFRD-1P60508 538 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 ARF6P62330 175 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 PAX8Q06710 450 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 AANATQ16613 207 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 IZUMO4Q1ZYL8 232 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 SPANXN5Q5MJ07 72 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 HSD17B13Q7Z5P4 300 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-216ENST00000484087 LINC00311Q8N616 119 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM217Q8N7C4 229 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 OR9G1Q8NH87 305 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 NANPQ8TBE9 248 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 SCGB1C1Q8TD33 95 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 DTD1Q8TEA8 209 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 TNFRSF14Q92956 283 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 GNPNAT1Q96EK6 184 aaPredicted RBP5.61□□□□□ -1.51
BRCA1-216ENST00000484087 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 TBX15Q96SF7 602 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 ATP5SQ99766 215 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 ARV1Q9H2C2 271 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 RBKSQ9H477 322 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 SIRT7Q9NRC8 400 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 SLC35D1Q9NTN3 355 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 ONECUT1Q9UBC0 465 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 NUP50Q9UKX7 468 aa5.61□□□□□ -1.51
BRCA1-216ENST00000484087 STRAPQ9Y3F4 350 aaKnown RBP5.61□□□□□ -1.51
BRCA1-216ENST00000484087 A0A087X0M5 115 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 PPIAL4CA0A0B4J2A2 164 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 A0A1B0GX30 115 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 SCO2A0A1W2PP80 73 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 RAB19A4D1S5 217 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 MFSD2BA6NFX1 497 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 DNAJC9-AS1A6NH13 148 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 UMAD1C9J7I0 102 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 KRBOX1C9JBD0 128 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 H3BP45 60 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms