RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TNFSF8P32971 234 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 ALDH3B2P48448 385 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 APOC4P55056 127 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 RPS27AP62979 156 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF45Q02386 682 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 ANKRD55Q3KP44 614 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF880Q6PDB4 577 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 BTNL8Q6UX41 500 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 CDH26Q8IXH8 852 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 APH1BQ8WW43 257 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 GGHQ92820 318 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 PGLYRP3Q96LB9 341 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 DERL3Q96Q80 235 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 OR2D2Q9H210 308 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 FGF20Q9NP95 211 aaPredicted RBP4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 RDH8Q9NYR8 311 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 GHRLQ9UBU3 117 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 MLXQ9UH92 298 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 CLEC2DQ9UHP7 191 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 AK3Q9UIJ7 227 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 TP53TG1Q9Y2A0 90 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 EXOSC1Q9Y3B2 195 aaKnown RBP4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 S4R3C0 116 aa4.44□□□□□ -1.7
SEMA3D-204ENST00000484038 TRBV9A0A0B4J1U6 114 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 TMEM213A2RRL7 107 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 SRRM4A7MD48 611 aaKnown RBP4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 LGALS9O00182 355 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 UBBP0CG47 229 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 DCKP27707 260 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 ARL3P36405 182 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 PRSS8Q16651 343 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 VMA21Q3ZAQ7 101 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 KCTD21Q4G0X4 260 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 C10orf55Q5SWW7 151 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 CADM3Q8N126 398 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 UXS1Q8NBZ7 420 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 NECAP1Q8NC96 275 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 OR1L6Q8NGR2 347 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 TRIM63Q969Q1 353 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 PTX4Q96A99 478 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 DGCR14Q96DF8 476 aaKnown RBP4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 RIMS4Q9H426 269 aaPredicted RBP4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 C12orf4Q9NQ89 552 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 C8orf4Q9NR00 106 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 NDUFA13Q9P0J0 144 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 UBQLN2Q9UHD9 624 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 MGAT4AQ9UM21 535 aa4.43□□□□□ -1.7
SEMA3D-204ENST00000484038 A0A087WXM4 84 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 IGKV1-6A0A0C4DH72 117 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 LOC100130705A0A1B0GUX0 176 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 IRGMA1A4Y4 181 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 BET1O15155 118 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 SOCS1O15524 211 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CRYZL1O95825 349 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CD3GP09693 182 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CTRB1P17538 263 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 RPL35AP18077 110 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 SRMP19623 302 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 MAPK3P27361 379 aaPredicted RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 MAP2K4P45985 399 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 UNC119Q13432 240 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 INSL4Q14641 139 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 NEDD8Q15843 81 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 MRGPRG-AS1Q2M3A8 158 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 RBM48Q5RL73 367 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 TMEM268Q5VZI3 342 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 GLT8D1Q68CQ7 371 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CTRB2Q6GPI1 263 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CLEC19AQ6UXS0 136 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 RBPMS2Q6ZRY4 209 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 C19orf35Q6ZS72 473 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 GPR141Q7Z602 305 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 CLVS1Q8IUQ0 354 aaPredicted RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 SPIN2AQ99865 258 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 ARPC5LQ9BPX5 153 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 SPIN2BQ9BPZ2 258 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 ZNF430Q9H8G1 570 aaPredicted RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 Q9N2K0 584 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 SDHAF2Q9NX18 166 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 PTTG2Q9NZH5 202 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 DIMT1Q9UNQ2 313 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 RBM7Q9Y580 266 aaKnown RBP4.42□□□□□ -1.7
SEMA3D-204ENST00000484038 A0A0A6YYD4 124 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 TRBV6-6A0A0A6YYG2 114 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 A8MWP6 167 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 TRDCB7Z8K6 153 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 UBE2CO00762 179 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 CREBL2O60519 120 aaPredicted RBP4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 WBP4O75554 376 aaKnown RBP4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 IFNA4P05014 189 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 SAA1P0DJI8 122 aaPredicted RBP4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 RRASP10301 218 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 CELP19835 753 aa4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 FCGR2BP31994 310 aaPredicted RBP4.41□□□□□ -1.7
SEMA3D-204ENST00000484038 RFX2P48378 723 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms