RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 OR2W1Q9Y3N9 320 aa9.43□□□□□ -0.9
UBR4-213ENST00000483922 IGHV3OR16-8A0A075B7F1 116 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 IGLC7A0M8Q6 106 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 PTGES3LE9PB15 166 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 HIST1H1BP16401 226 aaKnown RBP9.42□□□□□ -0.9
UBR4-213ENST00000483922 MAS1LP35410 378 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 PSMD7P51665 324 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 OR10A3P58181 314 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 MED22Q15528 200 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 C8orf59Q8N0T1 100 aaPredicted RBP9.42□□□□□ -0.9
UBR4-213ENST00000483922 C11orf45Q8TAV5 145 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 GALNT14Q96FL9 552 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 RARRES2Q99969 163 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 CHRDL1Q9BU40 450 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 UFC1Q9Y3C8 167 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 V9GY05 133 aa9.42□□□□□ -0.9
UBR4-213ENST00000483922 TGOLN2O43493 480 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
UBR4-213ENST00000483922 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
UBR4-213ENST00000483922 CRHBPP24387 322 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 PTBP1P26599 531 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBR4-213ENST00000483922 CALRP27797 417 aaKnown RBP9.41□□□□□ -0.9
UBR4-213ENST00000483922 ADMP35318 185 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 MFAP2P55001 183 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 RBMS2Q15434 407 aaKnown RBP9.41□□□□□ -0.9
UBR4-213ENST00000483922 PLET1Q6UQ28 207 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 C10orf67Q8IYJ2 551 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 OR10W1Q8NGF6 305 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 CXorf58Q96LI9 332 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 CSTL1Q9H114 145 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 SPATA2Q9UM82 520 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 PRELID3BQ9Y3B1 194 aa9.41□□□□□ -0.9
UBR4-213ENST00000483922 DEFA4P12838 97 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 HLA-GP17693 338 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 MAP2K4P45985 399 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
UBR4-213ENST00000483922 MRPS15P82914 257 aaKnown RBP9.4□□□□□ -0.9
UBR4-213ENST00000483922 PACRGLQ8N7B6 248 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 GVQW1Q8N7I0 195 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 OR4S2Q8NH73 311 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 CD300LFQ8TDQ1 290 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 TCTEX1D2Q8WW35 142 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.9
UBR4-213ENST00000483922 TAS2R8Q9NYW2 309 aa9.4□□□□□ -0.9
UBR4-213ENST00000483922 IGHV3-21A0A0B4J1V1 117 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 IGLL5B9A064 214 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 MED14OSP0DP75 135 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 TIMM50Q3ZCQ8 353 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 NR2C2APQ86WQ0 139 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 VSTM2AQ8TAG5 236 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 UFD1Q92890 307 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 RNF2Q99496 336 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 HSD17B10Q99714 261 aaKnown RBP9.39□□□□□ -0.91
UBR4-213ENST00000483922 BET1LQ9NYM9 111 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 MRPS7Q9Y2R9 242 aaKnown RBP9.39□□□□□ -0.91
UBR4-213ENST00000483922 ETV7Q9Y603 341 aa9.39□□□□□ -0.91
UBR4-213ENST00000483922 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 UPK2O00526 184 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 RTL8CO15255 209 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 TNFSF12O43508 249 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 XRCC3O43542 346 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 SSX5O60225 188 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 ARL6IP5O75915 188 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 DHFRP00374 187 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 IFNA4P05014 189 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 PTHLHP12272 177 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 CDNFQ49AH0 187 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 FAM90A2PQ658T7 463 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 LAMTOR1Q6IAA8 161 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 DAZ1Q9NQZ3 744 aaKnown RBP9.38□□□□□ -0.91
UBR4-213ENST00000483922 CCL28Q9NRJ3 127 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
UBR4-213ENST00000483922 OR4C46A6NHA9 309 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 IFITM5A6NNB3 132 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 K7EMT4 169 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 GIG44P09565 113 aaPredicted RBP9.37□□□□□ -0.91
UBR4-213ENST00000483922 HSMCR30P0CW71 290 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 RBMY1A1P0DJD3 496 aaKnown RBP9.37□□□□□ -0.91
UBR4-213ENST00000483922 RBMY1CP0DJD4 496 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 CD36P16671 472 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 RAB6AP20340 208 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 DTYMKP23919 212 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 TALDO1P37837 337 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 RBMY1FQ15415 496 aaKnown RBP9.37□□□□□ -0.91
UBR4-213ENST00000483922 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 SCARB1Q8WTV0 552 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 MFFQ9GZY8 342 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 DUSP21Q9H596 190 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 HERC1Q15751 4861 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 MUC4Q99102 2169 aa9.37□□□□□ -0.91
UBR4-213ENST00000483922 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
UBR4-213ENST00000483922 TEX50A0A1B0GTY4 177 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms