RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 G0S2P27469 103 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 PBLDP30039 288 aaPredicted RBP4.02□□□□□ -1.77
USP40-213ENST00000483216 CD70P32970 193 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 GABRA3P34903 492 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 RND3P61587 244 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 SELENOTP62341 195 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 OR5I1Q13606 314 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 BSXQ3C1V8 233 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 LINC01590Q5TEZ4 76 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 FBXW9Q5XUX1 488 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 C19orf35Q6ZS72 473 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 Q6ZVH6 145 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 OOSP2Q86WS3 158 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 ZNF100Q8IYN0 542 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 PRSS58Q8IYP2 241 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 NFAM1Q8NET5 270 aaPredicted RBP4.02□□□□□ -1.77
USP40-213ENST00000483216 OR2V1Q8NHB1 315 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 TMEM234Q8WY98 164 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 PP6455Q8WZ26 134 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 FGF13Q92913 245 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 ADIPOR1Q96A54 375 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 Q96M85 177 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 CIB3Q96Q77 187 aaPredicted RBP4.02□□□□□ -1.77
USP40-213ENST00000483216 C20orf24Q9BUV8 137 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 SNHG12Q9BXW3 62 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 KRTAP4-4Q9BYR3 166 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 OR2J1Q9GZK6 312 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 MAGT1Q9H0U3 335 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 PRO1933Q9H354 126 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 Q9H3A6 140 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 RBKSQ9H477 322 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 NAA60Q9H7X0 242 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 KCNIP2Q9NS61 270 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 SH3BGRL2Q9UJC5 107 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 MRPS16Q9Y3D3 137 aaKnown RBP4.02□□□□□ -1.77
USP40-213ENST00000483216 TIMM9Q9Y5J7 89 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 TRIOBPQ9H2D6 2365 aa4.02□□□□□ -1.77
USP40-213ENST00000483216 PTPRSQ13332 1948 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 MTCL1Q9Y4B5 1905 aaKnown RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 MYOFQ9NZM1 2061 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 DOCK6Q96HP0 2047 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 TRAV8-7A0A075B6U6 113 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 TRAV30A0A087WSZ9 112 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PRSS37A4D1T9 235 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 FAM231BA6NCW3 169 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 TMEM14DPA8MWL7 114 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 C17orf112F2Z3M2 114 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 SIRPB1O00241 398 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CDIPTO14735 213 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CCL16O15467 120 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 B4GALT2O60909 372 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 IGHMP01871 453 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 C1QCP02747 245 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GYPBP06028 91 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PGA4P0DJD7 388 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PGA5P0DJD9 388 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 ZNF728P0DKX0 622 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CTSEP14091 401 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 IL9P15248 144 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PGCP20142 388 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GNRHRP30968 328 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PRDX2P32119 198 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 BRS3P32247 399 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GALR1P47211 349 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 RPL29P47914 159 aaKnown RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 CARD18P57730 90 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 ERVS71-1P61550 626 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GRB2P62993 217 aaKnown RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 MRPS11P82912 194 aaKnown RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 ZNF92Q03936 586 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 SLC9A3R2Q15599 337 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 NSDHLQ15738 373 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 PLPPR5Q32ZL2 321 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 TMEM52BQ4KMG9 183 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 ZNF658BQ4V348 819 aaPredicted RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 OTPQ5XKR4 325 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 OR8G2PQ6IF36 304 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 WDR74Q6RFH5 385 aaPredicted RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 C12orf54Q6X4T0 127 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GTF2H5Q6ZYL4 71 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 DPY19L4Q7Z388 723 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 HSD11B1LQ7Z5J1 315 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CMTM8Q8IZV2 173 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 SIGLECL1Q8N7X8 197 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 OR2M7Q8NG81 312 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 OR4S1Q8NGB4 309 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 OR5AU1Q8NGC0 362 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CLDND2Q8NHS1 167 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CMTM2Q8TAZ6 248 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 MBD3L1Q8WWY6 194 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 RGP1Q92546 391 aaPredicted RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 FRZBQ92765 325 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 TNFRSF14Q92956 283 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 SLAMF6Q96DU3 332 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 SDSLQ96GA7 329 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 IMMP1LQ96LU5 166 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 GPER1Q99527 375 aa4.01□□□□□ -1.77
USP40-213ENST00000483216 CDX2Q99626 313 aaPredicted RBP4.01□□□□□ -1.77
USP40-213ENST00000483216 TXN2Q99757 166 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms