RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 TMEM213A2RRL7 107 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 LINC00473A8K010 186 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 SLC17A2O00624 439 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 SPRY2O43597 315 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 UCHL1P09936 223 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 SAA1P0DJI8 122 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-206ENST00000483030 DUTP33316 252 aaKnown RBP5.5□□□□□ -1.53
CSDE1-206ENST00000483030 ARL3P36405 182 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 CLDN12P56749 244 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 FAM106AQ4KMX7 169 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 LAIR2Q6ISS4 152 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 CLEC19AQ6UXS0 136 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 C19orf35Q6ZS72 473 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 SLC25A42Q86VD7 318 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 TPRA1Q86W33 373 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 WFDC3Q8IUB2 231 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 MMD2Q8IY49 270 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 DHRSXQ8N5I4 330 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 BPIFB6Q8NFQ5 453 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 OSR1Q8TAX0 266 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-206ENST00000483030 MAFIPQ8WZ33 124 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 ADTRPQ96IZ2 230 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 GFI1Q99684 422 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 DCUN1D5Q9BTE7 237 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 SPATA2Q9UM82 520 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 KCNK7Q9Y2U2 307 aa5.5□□□□□ -1.53
CSDE1-206ENST00000483030 AK6Q9Y3D8 172 aaKnown RBP5.5□□□□□ -1.53
CSDE1-206ENST00000483030 DPPA5A6NC42 116 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 E7EUB6 86 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 J3QRK9 145 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 CREBL2O60519 120 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-206ENST00000483030 FCGR3BO75015 233 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 FCGR3AP08637 254 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 IL6RP08887 468 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-206ENST00000483030 GNAO1P09471 354 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 SCAND1P57086 179 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 RAB4BP61018 213 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 PLA2G7Q13093 441 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 CDK10Q15131 360 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 RAB11BQ15907 218 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 DEFB135Q30KP9 77 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 LGALS9CQ6DKI2 356 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 BTNL8Q6UX41 500 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 RBPMS2Q6ZRY4 209 aaKnown RBP5.49□□□□□ -1.53
CSDE1-206ENST00000483030 Q6ZWC4 215 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 VKORC1L1Q8N0U8 176 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 OR56B1Q8NGI3 324 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 TMEM203Q969S6 136 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 FAM3DQ96BQ1 224 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 FYTTD1Q96QD9 318 aaKnown RBP5.49□□□□□ -1.53
CSDE1-206ENST00000483030 GINS4Q9BRT9 223 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 CABLES2Q9BTV7 478 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 PLCXD1Q9NUJ7 323 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 TP53TG1Q9Y2A0 90 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 ZNF257Q9Y2Q1 563 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 HERC2O95714 4834 aa5.49□□□□□ -1.53
CSDE1-206ENST00000483030 TRAV25A0A0B4J276 109 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 TEX22C9J3V5 150 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 UBE2CO00762 179 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 DENRO43583 198 aaKnown RBP5.48□□□□□ -1.53
CSDE1-206ENST00000483030 CLEC3BP05452 202 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 CDK1P06493 297 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 AREGP15514 252 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 RAB4AP20338 218 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 MAP2K4P45985 399 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 APOC4P55056 127 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 SPHARQ15513 63 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 ZNF585BQ52M93 769 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 OR2B11Q5JQS5 317 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 OR4A47Q6IF82 309 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 UNQ9165/PRO28630Q6UXU0 137 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 TMEM91Q6ZNR0 172 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 H1FOOQ8IZA3 346 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-206ENST00000483030 C8orf59Q8N0T1 100 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-206ENST00000483030 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 PHLDA1Q8WV24 401 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-206ENST00000483030 EEF1AKMT3Q96AZ1 226 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 RNF183Q96D59 192 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 RAB3CQ96E17 227 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 OR51E2Q9H255 320 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 DIABLOQ9NR28 239 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 SLC2A9Q9NRM0 540 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 UBQLN2Q9UHD9 624 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 RAB22AQ9UL26 194 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 FRAS1Q86XX4 4008 aa5.48□□□□□ -1.53
CSDE1-206ENST00000483030 A0A075B6Q4 140 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 IGKV1D-8A0A087WSZ0 117 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 IGHV3-35A0A0C4DH35 117 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 TMEM272A0A1B0GTI8 110 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 A0A1B0GW64 132 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 A8MWP6 167 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 PTGES3LE9PB15 166 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 RAB27BO00194 218 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 DIRAS3O95661 229 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 CRYGCP07315 174 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 STAG3L3P0CL85 134 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 C8orf88P0DMB2 117 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 GNB3P16520 340 aa5.47□□□□□ -1.53
CSDE1-206ENST00000483030 RPL35AP18077 110 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms