RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 TENM3Q9P273 2699 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 H0Y980 276 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 UPK2O00526 184 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 RBFOX2O43251 390 aaKnown RBP eCLIP7.94□□□□□ -1.14
CPSF4-212ENST00000482251 HPGDSO60760 199 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 TMEM127O75204 238 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 OR2C1O95371 312 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 HPRT1P00492 218 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 NQO2P16083 231 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 CTRB1P17538 263 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 PRSS3P35030 304 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 ARL3P36405 182 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 TAS2R31P59538 309 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 TAS2R46P59540 309 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 OR2B8PP59922 312 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 ERVK-16P61578 105 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 CD300EQ496F6 205 aaPredicted RBP7.94□□□□□ -1.14
CPSF4-212ENST00000482251 PHLDA2Q53GA4 152 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 CTRB2Q6GPI1 263 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 Q8N402 240 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 OR10W1Q8NGF6 305 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 OR4A5Q8NH83 315 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 COMMD5Q9GZQ3 224 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 NAA50Q9GZZ1 169 aaKnown RBP7.94□□□□□ -1.14
CPSF4-212ENST00000482251 WFDC10AQ9H1F0 79 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 PLEKHA3Q9HB20 300 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 NSG2Q9Y328 171 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 DMRT1Q9Y5R6 373 aa7.94□□□□□ -1.14
CPSF4-212ENST00000482251 RYR3Q15413 4870 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 IGLV11-55A0A075B6I3 123 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 IGHV3-35A0A0C4DH35 117 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 IGLC7A0M8Q6 106 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 ZNF320A2RRD8 509 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 C2orf70A6NJV1 201 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 MARCH11A6NNE9 402 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 GGCTO75223 188 aaKnown RBP7.93□□□□□ -1.14
CPSF4-212ENST00000482251 PGLYRP1O75594 196 aaPredicted RBP7.93□□□□□ -1.14
CPSF4-212ENST00000482251 DHFRP00374 187 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 CRYGCP07315 174 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 SMIM18P0DKX4 95 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 GPR183P32249 361 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 G6PCP35575 357 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 CD81P60033 236 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 GUCA2BQ16661 112 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 FCAMRQ8WWV6 532 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 EEF1AKMT3Q96AZ1 226 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 THAP7Q9BT49 309 aaPredicted RBP7.93□□□□□ -1.14
CPSF4-212ENST00000482251 HINT2Q9BX68 163 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 TUBA4BQ9H853 241 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 C19orf73Q9NVV2 129 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 COMMD9Q9P000 198 aa7.93□□□□□ -1.14
CPSF4-212ENST00000482251 IGHV3-21A0A0B4J1V1 117 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 FAM25AB3EWG3 89 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 FAM25CB3EWG5 89 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 FAM25GB3EWG6 89 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 KRASP01116 189 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 CD7P09564 240 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 FOLR2P14207 255 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 NAT1P18440 290 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 ELK1P19419 428 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 LPAR6P43657 344 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 TSPAN5P62079 268 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 POU2AF1Q16633 256 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 DHRS11Q6UWP2 260 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 LYSMD2Q8IV50 215 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 OR6F1Q8NGZ6 308 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 MUC7Q8TAX7 377 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 CD300LFQ8TDQ1 290 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 GPX8Q8TED1 209 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 BORCS5Q969J3 196 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 KCTD12Q96CX2 325 aaKnown RBP7.92□□□□□ -1.14
CPSF4-212ENST00000482251 WDR89Q96FK6 387 aaPredicted RBP7.92□□□□□ -1.14
CPSF4-212ENST00000482251 TM2D3Q9BRN9 247 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 AIFM2Q9BRQ8 373 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 QTRT1Q9BXR0 403 aaKnown RBP7.92□□□□□ -1.14
CPSF4-212ENST00000482251 PLEKHA2Q9HB19 425 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 RETNQ9HD89 108 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 SIGLEC8Q9NYZ4 499 aa7.92□□□□□ -1.14
CPSF4-212ENST00000482251 SMIM31A0A1B0GVY4 71 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 TMEM213A2RRL7 107 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 M0QYG6 137 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 GPR31O00270 319 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 APOA1P02647 267 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 OR13C7P0DN81 318 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 HIST1H1BP16401 226 aaKnown RBP7.91□□□□□ -1.14
CPSF4-212ENST00000482251 F2RP25116 425 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 RCVRNP35243 200 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 FAM209BQ5JX69 171 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 UNQ9165/PRO28630Q6UXU0 137 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 CMTM1Q8IZ96 169 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 DEFB125Q8N687 156 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 DGCR14Q96DF8 476 aaKnown RBP7.91□□□□□ -1.14
CPSF4-212ENST00000482251 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 NEURL2Q9BR09 285 aa7.91□□□□□ -1.14
CPSF4-212ENST00000482251 TEX50A0A1B0GTY4 177 aa7.9□□□□□ -1.14
CPSF4-212ENST00000482251 OR2T8A6NH00 312 aa7.9□□□□□ -1.14
CPSF4-212ENST00000482251 DBX1A6NMT0 343 aa7.9□□□□□ -1.14
CPSF4-212ENST00000482251 TPPPO94811 219 aa7.9□□□□□ -1.14
CPSF4-212ENST00000482251 GABARAPO95166 117 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms