RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 IGHV7-81A0A0B4J1V7 117 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 A0A0G2JRQ6 117 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 A0A1B0GU03 582 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 C15orf61A6NNL5 157 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 IGHG2P01859 326 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 IL6RP08887 468 aaPredicted RBP18.27■□□□□ 0.52
SHISA4-203ENST00000481699 FGF2P09038 288 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 P0C879 139 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 VDAC2P45880 294 aaPredicted RBP18.27■□□□□ 0.52
SHISA4-203ENST00000481699 RPL27AP46776 148 aaKnown RBP18.27■□□□□ 0.52
SHISA4-203ENST00000481699 SMCO1Q147U7 214 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 NMSQ5H8A3 153 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 Q6ZSV7 163 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 OR4F5Q8NH21 305 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 OR1S1Q8NH92 325 aa18.27■□□□□ 0.52
SHISA4-203ENST00000481699 A0A0B4J293 547 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 C13orf42A0A1B0GVH6 325 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 C5orf51A6NDU8 294 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 OPN1MWP04001 364 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 OPN1MW2P0DN77 364 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 OPN1MW3P0DN78 364 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 COMPP49747 757 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-203ENST00000481699 OR1L8Q8NGR8 309 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 FYTTD1Q96QD9 318 aaKnown RBP18.26■□□□□ 0.51
SHISA4-203ENST00000481699 HINT2Q9BX68 163 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 CACFD1Q9UGQ2 172 aa18.26■□□□□ 0.51
SHISA4-203ENST00000481699 FOXA2Q9Y261 457 aaPredicted RBP18.26■□□□□ 0.51
SHISA4-203ENST00000481699 AP4M1O00189 453 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 TSPAN9O75954 239 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 NDUFA7O95182 113 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 IFNA17P01571 189 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 Q6ZS46 218 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 OR5B3Q8NH48 314 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 SRSF12Q8WXF0 261 aaKnown RBP18.25■□□□□ 0.51
SHISA4-203ENST00000481699 QTRT1Q9BXR0 403 aaKnown RBP18.25■□□□□ 0.51
SHISA4-203ENST00000481699 MED28Q9H204 178 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 TMEM14BQ9NUH8 114 aa18.25■□□□□ 0.51
SHISA4-203ENST00000481699 DBX1A6NMT0 343 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 CCSO14618 274 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 GOSR2O14653 212 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 SLC25A6P12236 298 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 TMEM267Q0VDI3 215 aaPredicted RBP18.24■□□□□ 0.51
SHISA4-203ENST00000481699 MRGPRG-AS1Q2M3A8 158 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 C10orf55Q5SWW7 151 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 GSG1LQ6UXU4 331 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 Q8N2B8 174 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 COA4Q9NYJ1 87 aa18.24■□□□□ 0.51
SHISA4-203ENST00000481699 TEX50A0A1B0GTY4 177 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 MSGN1A6NI15 193 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 ATP6V0E1O15342 81 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 TRAPPC2P0DI81 140 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 TRAPPC2BP0DI82 140 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 IAH1Q2TAA2 248 aaPredicted RBP18.23■□□□□ 0.51
SHISA4-203ENST00000481699 Q6ZRM9 215 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 ZNF429Q86V71 674 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 MRPL41Q8IXM3 137 aaKnown RBP18.23■□□□□ 0.51
SHISA4-203ENST00000481699 TAF15Q92804 592 aaKnown RBP eCLIP18.23■□□□□ 0.51
SHISA4-203ENST00000481699 C16orf95Q9H693 158 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 ENY2Q9NPA8 101 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 ZNF257Q9Y2Q1 563 aa18.23■□□□□ 0.51
SHISA4-203ENST00000481699 ST8SIA3O43173 380 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 HKR1P10072 659 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 MYOD1P15172 320 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 HSPE1P61604 102 aaKnown RBP18.22■□□□□ 0.51
SHISA4-203ENST00000481699 NDPQ00604 133 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 ECSCRQ19T08 205 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.22■□□□□ 0.51
SHISA4-203ENST00000481699 FAM103A1Q9BTL3 118 aaKnown RBP18.22■□□□□ 0.51
SHISA4-203ENST00000481699 GON7Q9BXV9 100 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 GSKIPQ9P0R6 139 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 MGAT4CQ9UBM8 478 aa18.22■□□□□ 0.51
SHISA4-203ENST00000481699 LINC01548A6NM66 108 aa18.21■□□□□ 0.51
SHISA4-203ENST00000481699 TMEM95Q3KNT9 176 aa18.21■□□□□ 0.51
SHISA4-203ENST00000481699 SGMS2Q8NHU3 365 aa18.21■□□□□ 0.51
SHISA4-203ENST00000481699 WSB1Q9Y6I7 421 aa18.21■□□□□ 0.51
SHISA4-203ENST00000481699 COL6A5A8TX70 2615 aa18.21■□□□□ 0.51
SHISA4-203ENST00000481699 FBN1P35555 2871 aaKnown RBP18.21■□□□□ 0.51
SHISA4-203ENST00000481699 TRAV41A0A0B4J266 112 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 A0A1W2PN81 502 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 NXPH3O95157 252 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 IGF1P05019 195 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 CHRNA7P36544 502 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 HOXA1P49639 335 aaPredicted RBP18.2■□□□□ 0.5
SHISA4-203ENST00000481699 SPCS3P61009 180 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 SSBP2P81877 361 aaPredicted RBP18.2■□□□□ 0.5
SHISA4-203ENST00000481699 UNQ5815/PRO19632Q6UWF5 114 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 PLEKHA3Q9HB20 300 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 LINC00527Q9UJ94 153 aa18.2■□□□□ 0.5
SHISA4-203ENST00000481699 CEBPZOSA8MTT3 80 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 MPTX1A8MV57 137 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 APELAP0DMC3 54 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 SLC35B1P78383 322 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 HSD17B13Q7Z5P4 300 aaPredicted RBP18.19■□□□□ 0.5
SHISA4-203ENST00000481699 STPG2Q8N412 459 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 ZBTB8BQ8NAP8 495 aaPredicted RBP18.19■□□□□ 0.5
SHISA4-203ENST00000481699 LFNGQ8NES3 379 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 OR5M8Q8NGP6 311 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 OR52E5Q8NH55 327 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 OR10C1Q96KK4 312 aa18.19■□□□□ 0.5
SHISA4-203ENST00000481699 C2orf50Q96LR7 162 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms