RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 H3BQV1 296 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 ZNF682O95780 498 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 IGHV1-69P01742 117 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 ZNF22P17026 224 aaPredicted RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 LPAR6P43657 344 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 RBM11P57052 281 aaKnown RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 TAS2R30P59541 319 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 TAS2R20P59543 309 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 AMMECR1LQ6DCA0 310 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 C3orf33Q6P1S2 294 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 GOLT1AQ6ZVE7 132 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 C1orf64Q8NEQ6 169 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 OR13C6PQ8NH95 151 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 ACOT12Q8WYK0 555 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 GINS3Q9BRX5 216 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 CCDC90BQ9GZT6 254 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 C11orf68Q9H3H3 251 aaKnown RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 EFCAB1Q9HAE3 211 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 CYTL1Q9NRR1 136 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 SMPXQ9UHP9 88 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 MCTS1Q9ULC4 181 aaKnown RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 PYCARDQ9ULZ3 195 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 UFC1Q9Y3C8 167 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 HEY1Q9Y5J3 304 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.02□□□□□ -1.93
COPA-203ENST00000481040 SPATA31E1Q6ZUB1 1445 aa3.02□□□□□ -1.93
COPA-203ENST00000481040 HECW1Q76N89 1606 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 LTBP4Q8N2S1 1624 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 SIPA1L1O43166 1804 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 A0A1B0GV72 72 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 S1PR2O95136 353 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 IGKV3-11P04433 115 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 C8GP07360 202 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 RPSAP08865 295 aaKnown RBP3.01□□□□□ -1.93
COPA-203ENST00000481040 RBP1P09455 135 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 ERP29P30040 261 aaKnown RBP3.01□□□□□ -1.93
COPA-203ENST00000481040 S100A7P31151 101 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 HBA1P69905 142 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 ZNF117Q03924 483 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 EIF4EBP2Q13542 120 aaPredicted RBP3.01□□□□□ -1.93
COPA-203ENST00000481040 ZNF141Q15928 474 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 TAC4Q86UU9 113 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 BIN3Q9NQY0 253 aa3.01□□□□□ -1.93
COPA-203ENST00000481040 BICRAQ9NZM4 1560 aa3□□□□□ -1.93
COPA-203ENST00000481040 ZNF407Q9C0G0 2248 aa3□□□□□ -1.93
COPA-203ENST00000481040 SCN10AQ9Y5Y9 1956 aa3□□□□□ -1.93
COPA-203ENST00000481040 TRAPPC13A5PLN9 417 aa3□□□□□ -1.93
COPA-203ENST00000481040 DPRXA6NFQ7 191 aa3□□□□□ -1.93
COPA-203ENST00000481040 UBFD1O14562 309 aaKnown RBP3□□□□□ -1.93
COPA-203ENST00000481040 HMGB3O15347 200 aaKnown RBP3□□□□□ -1.93
COPA-203ENST00000481040 CPSF4O95639 269 aaKnown RBP3□□□□□ -1.93
COPA-203ENST00000481040 C1QBP02746 253 aa3□□□□□ -1.93
COPA-203ENST00000481040 SULT1A3P0DMM9 295 aa3□□□□□ -1.93
COPA-203ENST00000481040 SULT1A4P0DMN0 295 aa3□□□□□ -1.93
COPA-203ENST00000481040 SMIM10L2AP0DMW4 78 aa3□□□□□ -1.93
COPA-203ENST00000481040 SMIM10L2BP0DMW5 78 aa3□□□□□ -1.93
COPA-203ENST00000481040 CPMP14384 443 aa3□□□□□ -1.93
COPA-203ENST00000481040 CSN1S1P47710 185 aa3□□□□□ -1.93
COPA-203ENST00000481040 IBA57Q5T440 356 aaKnown RBP3□□□□□ -1.93
COPA-203ENST00000481040 C12orf45Q8N5I9 185 aaPredicted RBP3□□□□□ -1.93
COPA-203ENST00000481040 CLDND2Q8NHS1 167 aa3□□□□□ -1.93
COPA-203ENST00000481040 GPR119Q8TDV5 335 aa3□□□□□ -1.93
COPA-203ENST00000481040 ZHX1-C8orf76Q96EF9 292 aa3□□□□□ -1.93
COPA-203ENST00000481040 OR8B2Q96RD0 313 aa3□□□□□ -1.93
COPA-203ENST00000481040 TTTY13Q9BZ97 58 aa3□□□□□ -1.93
COPA-203ENST00000481040 C20orf27Q9GZN8 174 aa3□□□□□ -1.93
COPA-203ENST00000481040 PARVBQ9HBI1 364 aa3□□□□□ -1.93
COPA-203ENST00000481040 FUT9Q9Y231 359 aa3□□□□□ -1.93
COPA-203ENST00000481040 KDM6BO15054 1643 aa3□□□□□ -1.93
COPA-203ENST00000481040 SYNMO15061 1565 aa3□□□□□ -1.93
COPA-203ENST00000481040 ARAP1Q96P48 1450 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 GPR179Q6PRD1 2367 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 TRAV9-1A0A075B6T8 112 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 GNG14A0A1W2PPG7 69 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 PPIBP23284 216 aaKnown RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 SERPINB1P30740 379 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 CD200P41217 278 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 TCTAP57738 103 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 CCL20P78556 96 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 FLI1Q01543 452 aaPredicted RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 TSNQ15631 228 aaKnown RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 LY6EQ16553 131 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 C2orf91Q6ZV80 131 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 TEX47Q8TBZ9 253 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 TOMM6Q96B49 74 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 GPR146Q96CH1 333 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 RSPO3Q9BXY4 272 aaPredicted RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 MARCOQ9UEW3 520 aaPredicted RBP2.99□□□□□ -1.93
COPA-203ENST00000481040 SS18L2Q9UHA2 77 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 CACNA1DQ01668 2161 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 NID2Q14112 1375 aa2.99□□□□□ -1.93
COPA-203ENST00000481040 MDFIC2A0A1B0GVS7 189 aa2.98□□□□□ -1.93
COPA-203ENST00000481040 PPP5D1E7EU14 171 aa2.98□□□□□ -1.93
COPA-203ENST00000481040 TP53I11O14683 189 aa2.98□□□□□ -1.93
COPA-203ENST00000481040 SYNGR2O43760 224 aa2.98□□□□□ -1.93
COPA-203ENST00000481040 NPYP01303 97 aa2.98□□□□□ -1.93
COPA-203ENST00000481040 COL8A2P25067 703 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms