RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 EIF4EBP1Q13541 118 aaPredicted RBP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 C5orf64Q2M2E5 130 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 TMEM268Q5VZI3 342 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 THOC7Q6I9Y2 204 aaKnown RBP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 LCNL1Q6ZST4 164 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 SPAG16Q8N0X2 631 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 STPG2Q8N412 459 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 OR8H1Q8NGG4 311 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 OR4S2Q8NH73 311 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 RNASE11Q8TAA1 199 aaKnown RBP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 DDB2Q92466 427 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 LSM10Q969L4 123 aaKnown RBP9.61□□□□□ -0.87
PTPRF-213ENST00000481019 OR2A7Q96R45 310 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 TP53RKQ96S44 253 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 NMES1Q9C002 83 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 FBXO7Q9Y3I1 522 aa9.61□□□□□ -0.87
PTPRF-213ENST00000481019 PSMB11A5LHX3 300 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 SRRM4A7MD48 611 aaKnown RBP9.6□□□□□ -0.87
PTPRF-213ENST00000481019 FAM25EA8MYX2 175 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 RRHO14718 337 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 HRASP01112 189 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 IGLV2-23P01705 113 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 RLN2P04090 185 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 HOXB5P09067 269 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
PTPRF-213ENST00000481019 BRWD1-AS2P59051 145 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 ERVK-16P61578 105 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 CFHR3Q02985 330 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 PSG5Q15238 335 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 ANKRD55Q3KP44 614 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 SP6Q3SY56 376 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 NDUFA11Q86Y39 141 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 OR11H7Q8NGC8 314 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 C2orf50Q96LR7 162 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 PLEKHA2Q9HB19 425 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 SLC35D1Q9NTN3 355 aa9.6□□□□□ -0.87
PTPRF-213ENST00000481019 A0A1B0GU03 582 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 C13orf42A0A1B0GVH6 325 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 TCRBV4S1A1TA0A5B7 111 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 G3V318 75 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 ATP6V0E1O15342 81 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 HLA-DRB1P01911 266 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 LPAR6P43657 344 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 AKR1C2P52895 323 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 RPS16P62249 146 aaKnown RBP9.59□□□□□ -0.87
PTPRF-213ENST00000481019 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
PTPRF-213ENST00000481019 SMCO1Q147U7 214 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 C2orf68Q2NKX9 166 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 ZFP69Q49AA0 526 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 SELENOHQ8IZQ5 122 aaKnown RBP9.59□□□□□ -0.87
PTPRF-213ENST00000481019 ST6GAL2Q96JF0 529 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 HYLS1Q96M11 299 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 RANGRFQ9HD47 186 aaPredicted RBP9.59□□□□□ -0.87
PTPRF-213ENST00000481019 WSB1Q9Y6I7 421 aa9.59□□□□□ -0.87
PTPRF-213ENST00000481019 AP4M1O00189 453 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 LY86O95711 162 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 CRYGBP07316 175 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 NQO2P16083 231 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 CXCL3P19876 107 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 C4BPBP20851 252 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 CX3CL1P78423 397 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 PJVKQ0ZLH3 352 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
PTPRF-213ENST00000481019 C19orf54Q5BKX5 351 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 OR2B11Q5JQS5 317 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 GGNBP1Q5YKI7 109 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 PDPNQ86YL7 162 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 FOXRED2Q8IWF2 684 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 OR2T35Q8NGX2 323 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 OSR1Q8TAX0 266 aaPredicted RBP9.58□□□□□ -0.88
PTPRF-213ENST00000481019 RNF5Q99942 180 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 PARP11Q9NR21 331 aa9.58□□□□□ -0.88
PTPRF-213ENST00000481019 METTL1Q9UBP6 276 aaKnown RBP9.58□□□□□ -0.88
PTPRF-213ENST00000481019 SLC25A17O43808 307 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 FCGR3BO75015 233 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 C1QBP02746 253 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 IGF1P05019 195 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 RPLP1P05386 114 aaKnown RBP9.57□□□□□ -0.88
PTPRF-213ENST00000481019 LGALS7P47929 136 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 TMEM177Q53S58 311 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 H2BFWTQ7Z2G1 175 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 LYZL2Q7Z4W2 148 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 VSTM2AQ8TAG5 236 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 THAP6Q8TBB0 222 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 FLYWCH2Q96CP2 140 aaKnown RBP9.57□□□□□ -0.88
PTPRF-213ENST00000481019 FAM103A1Q9BTL3 118 aaKnown RBP9.57□□□□□ -0.88
PTPRF-213ENST00000481019 COA4Q9NYJ1 87 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 KIAA1456Q9P272 454 aa9.57□□□□□ -0.88
PTPRF-213ENST00000481019 FAM90A26D6RGX4 464 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 KCNAB3O43448 404 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 SOX15O60248 233 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 ADAP1O75689 374 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 CRYZL1O95825 349 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 CA2P00918 260 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 PVALBP20472 110 aaPredicted RBP9.56□□□□□ -0.88
PTPRF-213ENST00000481019 PSMB6P28072 239 aa9.56□□□□□ -0.88
PTPRF-213ENST00000481019 PPIFP30405 207 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms