RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 C15orf32Q32M92 178 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 VAX1Q5SQQ9 334 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 OR9G4Q8NGQ1 327 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 C15orf40Q8WUR7 153 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 DGCR14Q96DF8 476 aaKnown RBP13.01□□□□□ -0.33
HSPG2-209ENST00000480900 EXTL2Q9UBQ6 330 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 KLK9Q9UKQ9 250 aa13.01□□□□□ -0.33
HSPG2-209ENST00000480900 CGB1A6NKQ9 187 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 MARCH11A6NNE9 402 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 OR2J3O76001 311 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 IGLV1-51P01701 117 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 GP9P14770 177 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 MYOD1P15172 320 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 CTRB1P17538 263 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 S100GP29377 79 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 UCP3P55916 312 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 OR2B8PP59922 312 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 TATDN3Q17R31 274 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 CADM3Q8N126 398 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 BCL7BQ9BQE9 202 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
HSPG2-209ENST00000480900 RSRP1Q9BUV0 290 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 COMMD5Q9GZQ3 224 aa13□□□□□ -0.33
HSPG2-209ENST00000480900 FAM212BQ9NTI7 297 aaPredicted RBP13□□□□□ -0.33
HSPG2-209ENST00000480900 TRAV3A0A0B4J244 114 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 BMPR1BO00238 502 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 HIST1H1BP16401 226 aaKnown RBP12.99□□□□□ -0.33
HSPG2-209ENST00000480900 TBPP20226 339 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 LPAR6P43657 344 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 SPCS2Q15005 226 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
HSPG2-209ENST00000480900 C11orf87Q6NUJ2 197 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 IL34Q6ZMJ4 242 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 C19orf35Q6ZS72 473 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 CLVS1Q8IUQ0 354 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-209ENST00000480900 RAB2BQ8WUD1 216 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 FCAMRQ8WWV6 532 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 FANCD2OSQ96PS1 177 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 MTFP1Q9UDX5 166 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 FBXL7Q9UJT9 491 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 SMAD5-AS1Q9Y6J3 95 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 DNAH9Q9NYC9 4486 aa12.99□□□□□ -0.33
HSPG2-209ENST00000480900 IGLC7A0M8Q6 106 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 NHLRC4P0CG21 123 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-209ENST00000480900 ZNF585BQ52M93 769 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 PHLDA2Q53GA4 152 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 RNASE12Q5GAN4 147 aaKnown RBP12.98□□□□□ -0.33
HSPG2-209ENST00000480900 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
HSPG2-209ENST00000480900 SLC38A6Q8IZM9 456 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 ABHD1Q96SE0 405 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 QTRT1Q9BXR0 403 aaKnown RBP12.98□□□□□ -0.33
HSPG2-209ENST00000480900 SIGLEC8Q9NYZ4 499 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 KLK11Q9UBX7 282 aa12.98□□□□□ -0.33
HSPG2-209ENST00000480900 M0QYG6 137 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 RGS5O15539 181 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 IFNA6P05013 189 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 DEFA4P12838 97 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 RPA2P15927 270 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 TMBIM6P55061 237 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-209ENST00000480900 HAPLN4Q86UW8 402 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 ARRDC1Q8N5I2 433 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 MIXL1Q9H2W2 232 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
HSPG2-209ENST00000480900 PEMTQ9UBM1 199 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
HSPG2-209ENST00000480900 IGLV11-55A0A075B6I3 123 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 NDUFB8O95169 186 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 KRASP01116 189 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 REG1AP05451 166 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 CSN3P07498 182 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 G6PCP35575 357 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 RPL5P46777 297 aaKnown RBP12.96□□□□□ -0.33
HSPG2-209ENST00000480900 TBC1D26Q86UD7 250 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 LAX1Q8IWV1 398 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 OR1L8Q8NGR8 309 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 CCDC140Q96MF4 163 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
HSPG2-209ENST00000480900 H0Y980 276 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 CTDSP2O14595 271 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 SNAPC5O75971 98 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 CD3DP04234 171 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 TRAPPC2P0DI81 140 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 TRAPPC2BP0DI82 140 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 MRPS10P82664 201 aaKnown RBP12.95□□□□□ -0.34
HSPG2-209ENST00000480900 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
HSPG2-209ENST00000480900 LHFPL1Q86WI0 220 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 DYNC2LI1Q8TCX1 351 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 EEF1AKMT3Q96AZ1 226 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 ZNF486Q96H40 463 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-209ENST00000480900 TSC22D3Q99576 134 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 PRNDQ9UKY0 176 aa12.95□□□□□ -0.34
HSPG2-209ENST00000480900 TRBV7-1A0A0A6YYK4 115 aa12.94□□□□□ -0.34
HSPG2-209ENST00000480900 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
HSPG2-209ENST00000480900 PPP5D1E7EU14 171 aa12.94□□□□□ -0.34
HSPG2-209ENST00000480900 GABARAPH6UMI1 98 aa12.94□□□□□ -0.34
HSPG2-209ENST00000480900 GGCTO75223 188 aaKnown RBP12.94□□□□□ -0.34
HSPG2-209ENST00000480900 CD74P04233 296 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms