RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 AKIRIN2Q53H80 203 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF695Q8IW36 515 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 PUSL1Q8N0Z8 303 aaKnown RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TCTEX1D1Q8N7M0 179 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 CCDC71LQ8N9Z2 235 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 MINDY2Q8NBR6 621 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM167AQ8TBQ9 72 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 FYTTD1Q96QD9 318 aaKnown RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 AIFM2Q9BRQ8 373 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 COA4Q9NYJ1 87 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 NUBP2Q9Y5Y2 271 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TRAV3A0A0B4J244 114 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TEX13DA0A0J9YY54 714 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 HLA-GP17693 338 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 CD40LGP29965 261 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 ECI1P42126 302 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 RPL27AP46776 148 aaKnown RBP5.38□□□□□ -1.55
BRCA1-215ENST00000478531 RAB9AP51151 201 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 RAB25P57735 213 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 OR2B8PP59922 312 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 RND3P61587 244 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 BAK1Q16611 211 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TRIM16LQ309B1 348 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF585BQ52M93 769 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 C19orf54Q5BKX5 351 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 ASPHD1Q5U4P2 390 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 OR5M8Q8NGP6 311 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 CITED4Q96RK1 184 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 TP53RKQ96S44 253 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 ZFP57Q9NU63 452 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 SLC2A8Q9NY64 477 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 BET1LQ9NYM9 111 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 NSG2Q9Y328 171 aa5.38□□□□□ -1.55
BRCA1-215ENST00000478531 C3orf85A0A1B0GTC6 90 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 HMX3A6NHT5 357 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 H0Y980 276 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 IGHV3-11P01762 117 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 PRH1P02810 166 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 TRGV3P03979 118 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 CTSDP07339 412 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-215ENST00000478531 SURF2Q15527 256 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-215ENST00000478531 SP6Q3SY56 376 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 C19orf35Q6ZS72 473 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 LINC00469Q8N7U9 141 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 RNF152Q8N8N0 203 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 GDPD1Q8N9F7 314 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 OR4A5Q8NH83 315 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 RNASE11Q8TAA1 199 aaKnown RBP5.37□□□□□ -1.55
BRCA1-215ENST00000478531 SPIN2AQ99865 258 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 SPIN2BQ9BPZ2 258 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 RTBDNQ9BSG5 229 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-215ENST00000478531 COMMD5Q9GZQ3 224 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 ALX4Q9H161 411 aaPredicted RBP5.37□□□□□ -1.55
BRCA1-215ENST00000478531 C5orf66Q9H5L9 145 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 GNB4Q9HAV0 340 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 VSIG4Q9Y279 399 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 TGP01266 2768 aa5.37□□□□□ -1.55
BRCA1-215ENST00000478531 A0A1B0GW64 132 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 TEX22C9J3V5 150 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 E7EUB6 86 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 UPK2O00526 184 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 RBMXL2O75526 392 aaKnown RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 IGKV1-39P01597 117 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 IGKV1D-39P04432 117 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 REG1AP05451 166 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 IL6RP08887 468 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 OR5AC1P0C628 307 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 OR9G9P0C7N8 305 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 AKR1C4P17516 323 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 CD33P20138 364 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 MAS1LP35410 378 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 CDX1P47902 265 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 AKR1C2P52895 323 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF45Q02386 682 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 POU2AF1Q16633 256 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 ETV3LQ6ZN32 361 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 H2BFWTQ7Z2G1 175 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 TMED4Q7Z7H5 227 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 SLC7A5P1Q8MH63 180 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 ZNF491Q8N8L2 437 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 ADAD2Q8NCV1 583 aaKnown RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 C4orf3Q8WVX3 66 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 RAX2Q96IS3 184 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 SDHCQ99643 169 aaPredicted RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 HINT2Q9BX68 163 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 NAA60Q9H7X0 242 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 PRKDCP78527 4128 aaKnown RBP5.36□□□□□ -1.55
BRCA1-215ENST00000478531 SNAPC5O75971 98 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 IL7P13232 177 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 AREGP15514 252 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 CCR6P51684 374 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 IZUMO4Q1ZYL8 232 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 C1QL4Q86Z23 238 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 OR11H1Q8NG94 326 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 OR4A16Q8NH70 328 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 MYOZ3Q8TDC0 251 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 ANAPC16Q96DE5 110 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 SEC22AQ96IW7 307 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 UBE2E2Q96LR5 201 aa5.36□□□□□ -1.55
BRCA1-215ENST00000478531 TMEM68Q96MH6 324 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms