RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 MRPS14O60783 128 aaKnown RBP12.48□□□□□ -0.41
TRIM13-208ENST00000478111 CLEC3BP05452 202 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 HIST1H1BP16401 226 aaKnown RBP12.48□□□□□ -0.41
TRIM13-208ENST00000478111 HSPA13P48723 471 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 OR2B8PP59922 312 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 GABARAPL2P60520 117 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 MSMO1Q15800 293 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 TIMM50Q3ZCQ8 353 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 SLC16A13Q7RTY0 426 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 SPARTQ8N0X7 666 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 GVQW1Q8N7I0 195 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 VCX3BQ9H321 246 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 RHBDL2Q9NX52 303 aa12.48□□□□□ -0.41
TRIM13-208ENST00000478111 RRP15Q9Y3B9 282 aaKnown RBP12.48□□□□□ -0.41
TRIM13-208ENST00000478111 IGLC7A0M8Q6 106 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 SCAF4O95104 1147 aaKnown RBP12.47□□□□□ -0.41
TRIM13-208ENST00000478111 DHFRP00374 187 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 FCGR2CP31995 323 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 SPAG16Q8N0X2 631 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 BEST4Q8NFU0 473 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 OR52B4Q8NGK2 314 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 OR5H6Q8NGV6 325 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 OR4A5Q8NH83 315 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 ZNF502Q8TBZ5 544 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 SLC25A38Q96DW6 304 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 RAB26Q9ULW5 256 aa12.47□□□□□ -0.41
TRIM13-208ENST00000478111 TRBV7-1A0A0A6YYK4 115 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 RBFOX2O43251 390 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM13-208ENST00000478111 CLEC2LP0C7M8 214 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 HOGA1Q86XE5 327 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 OR13F1Q8NGS4 319 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 CXorf58Q96LI9 332 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 GGTLC1Q9BX51 225 aa12.46□□□□□ -0.41
TRIM13-208ENST00000478111 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
TRIM13-208ENST00000478111 TRAV25A0A0B4J276 109 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 SULT1C2O00338 296 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 UPK2O00526 184 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 PPYP01298 95 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 DEFA4P12838 97 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 PSMB9P28065 219 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 SDC2P34741 201 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 ZBTB34Q8NCN2 500 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 RNF167Q9H6Y7 350 aa12.45□□□□□ -0.42
TRIM13-208ENST00000478111 IGHV3-35A0A0C4DH35 117 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 HPRT1P00492 218 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 PTBP1P26599 531 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM13-208ENST00000478111 GPR183P32249 361 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 ELLP55199 621 aaPredicted RBP12.44□□□□□ -0.42
TRIM13-208ENST00000478111 TAS2R31P59538 309 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 ARPC4P59998 168 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 ZNF585BQ52M93 769 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 OR10W1Q8NGF6 305 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 MARC2Q969Z3 335 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 AIFM2Q9BRQ8 373 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 ZNF436Q9C0F3 470 aaPredicted RBP12.44□□□□□ -0.42
TRIM13-208ENST00000478111 HRASLSQ9HDD0 168 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
TRIM13-208ENST00000478111 SSR3Q9UNL2 185 aa12.44□□□□□ -0.42
TRIM13-208ENST00000478111 VPS13DQ5THJ4 4388 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 NQO2P16083 231 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 SCAND1P57086 179 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 EWSR1Q01844 656 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRIM13-208ENST00000478111 MXD1Q05195 221 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 ANKRD55Q3KP44 614 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 ZNF818PQ6ZRF7 136 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 SRSF8Q9BRL6 282 aaKnown RBP12.43□□□□□ -0.42
TRIM13-208ENST00000478111 SLC5A7Q9GZV3 580 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 AUNIPQ9H7T9 357 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 ETV7Q9Y603 341 aa12.43□□□□□ -0.42
TRIM13-208ENST00000478111 TGOLN2O43493 480 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 S1PR2O95136 353 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 FCER2P06734 321 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 FGF2P09038 288 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 PLET1Q6UQ28 207 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 OR1L6Q8NGR2 347 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 GIMAP1Q8WWP7 306 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 LINC00476Q8WZB0 136 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 COMMD5Q9GZQ3 224 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 TMEM140Q9NV12 185 aa12.42□□□□□ -0.42
TRIM13-208ENST00000478111 A0A0A6YYH2 397 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 A6NJ64 397 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 MFAP2P55001 183 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 FXYD4P59646 89 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 WT1-ASQ06250 92 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 CATR1Q13166 79 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 RBPMS2Q6ZRY4 209 aaKnown RBP12.41□□□□□ -0.42
TRIM13-208ENST00000478111 OR2C3Q8N628 320 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 VN1R17PQ8TDU5 208 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 FCGR1BQ92637 280 aa12.41□□□□□ -0.42
TRIM13-208ENST00000478111 QTRT1Q9BXR0 403 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms