RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MBD3L2Q8NHZ7 208 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 MRGPRDQ8TDS7 321 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 DTD1Q8TEA8 209 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CA5BP1Q8WTZ4 195 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 LRRC29Q8WV35 223 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 LHX4Q969G2 390 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 C5orf30Q96GV9 206 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 AGMATQ9BSE5 352 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ACTR3CQ9C0K3 210 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 CTDSP1Q9GZU7 261 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 NCOR1P1Q9H4R4 102 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF665Q9H7R5 613 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 MANBALQ9NQG1 85 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 ZNF71Q9NQZ8 489 aaPredicted RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 SLC39A9Q9NUM3 307 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 UFSP2Q9NUQ7 469 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 JPT1Q9UK76 154 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 SLC25A15Q9Y619 301 aa4.09□□□□□ -1.75
SF3B6-202ENST00000478050 PRRC2CQ9Y520 2896 aaKnown RBP4.09□□□□□ -1.75
SF3B6-202ENST00000478050 DSCAMO60469 2012 aa4.09□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV3-64DA0A0J9YX35 117 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 A0A1W2PPE3 182 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PCP4L1A6NKN8 68 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF785A8K8V0 405 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PMS2P5A8MQ11 134 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CEBPZOSA8MTT3 80 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 TMEM250H0YL14 139 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CLDN34H7C241 214 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 J3KRW8 73 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 MGST3O14880 152 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CYB5BO43169 146 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 RBFOX2O43251 390 aaKnown RBP eCLIP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 YPEL1O60688 119 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZG16O60844 167 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 RAMP3O60896 148 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF737O75373 536 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 TNFSF13O75888 250 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 DYSFO75923 2080 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 HPRT1P00492 218 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 KRASP01116 189 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CGAP01215 116 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV3-13P01766 116 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FBP1P09467 338 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FGF7P21781 194 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PRDX2P32119 198 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 DUTP33316 252 aaKnown RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 GLRXP35754 106 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 RPS10P46783 165 aaKnown RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 GPR12P47775 334 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PSMB3P49720 205 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FABP6P51161 128 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FGF8P55075 233 aaPredicted RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ELLP55199 621 aaPredicted RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 GNB2P62879 340 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 RPP30P78346 268 aaKnown RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FABP9Q0Z7S8 132 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FOXF2Q12947 444 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 KIAA0141Q14154 515 aaPredicted RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ELOBQ15370 118 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF674Q2M3X9 581 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 DEFB109BQ30KR1 87 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ACOT6Q3I5F7 207 aaPredicted RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 Q3ZCU0 254 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 AARDQ4LEZ3 155 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 OR2B11Q5JQS5 317 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 FFAR4Q5NUL3 377 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 TIMM23BQ5SRD1 257 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PRR14LQ5THK1 2151 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ACSM6Q6P461 480 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 C1orf87Q8N0U7 546 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZADH2Q8N4Q0 377 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 GCSAMQ8N6F7 178 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CD177Q8N6Q3 437 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 OR52E5Q8NH55 327 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 Q8WTZ3 238 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 R3HDM4Q96D70 268 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 STARD4Q96DR4 205 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 YPEL2Q96QA6 119 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF251Q9BRH9 671 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 OPN3Q9H1Y3 402 aaPredicted RBP4.08□□□□□ -1.76
SF3B6-202ENST00000478050 VSIRQ9H7M9 311 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 MSL2Q9HCI7 577 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 SDF2L1Q9HCN8 221 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CLN8Q9UBY8 286 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 NAT8Q9UHE5 227 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 PSG11Q9UQ72 335 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 GAB2Q9UQC2 676 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CRYBG3Q68DQ2 2970 aa4.08□□□□□ -1.76
SF3B6-202ENST00000478050 CSMD1Q96PZ7 3565 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 ADGRG4Q8IZF6 3080 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 OTOGQ6ZRI0 2925 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 TRBV24-1A0A075B6N3 115 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 IGHV3-43A0A0B4J1X8 118 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 SMCO3A2RU48 225 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 MARCH11A6NNE9 402 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 LINC00473A8K010 186 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 ZNF727A8MUV8 499 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 MPDU1O75352 247 aa4.07□□□□□ -1.76
SF3B6-202ENST00000478050 RBMXL2O75526 392 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms