RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 A0A1B0GX30 115 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 CRYM-AS1A6NIL9 109 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 SNRPGP15A8MWD9 76 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 IGHV3-7P01780 117 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 BCAP31P51572 246 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 PRRX1P54821 245 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 RUNX1Q01196 453 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 TMEM65Q6PI78 240 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF818PQ6ZRF7 136 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF491Q8N8L2 437 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 C8orf31Q8N9H6 132 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF439Q8NDP4 499 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 BVESQ8NE79 360 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 OR52B4Q8NGK2 314 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 OR9G1Q8NH87 305 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF431Q8TF32 576 aaPredicted RBP7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 CASTOR1Q8WTX7 329 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 OR51J1Q9H342 316 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 NAA60Q9H7X0 242 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 LIN7CQ9NUP9 197 aaKnown RBP7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 PLA2G2EQ9NZK7 142 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF221Q9UK13 617 aa7.44□□□□□ -1.22
SMARCB1-206ENST00000477836 C9orf170A2RU37 121 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 SLC31A2O15432 143 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 TNFSF12O43508 249 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 SFT2D2O95562 160 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 CD34P28906 385 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 SRPXP78539 464 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 CATR1Q13166 79 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 KIAA0141Q14154 515 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 CT45A1Q5HYN5 189 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 SLC25A48Q6ZT89 311 aaKnown RBP7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 TBC1D26Q86UD7 250 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 CADM3Q8N126 398 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 ZBTB34Q8NCN2 500 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 OR10X1Q8NGY0 326 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 CT45A3Q8NHU0 189 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 COQ8AQ8NI60 647 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 MYOZ3Q8TDC0 251 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 ABHD14BQ96IU4 210 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 PHB2Q99623 299 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 MED28Q9H204 178 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 KLK15Q9H2R5 256 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 PIPOXQ9P0Z9 390 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 RNF150Q9ULK6 438 aa7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 AMMECR1Q9Y4X0 333 aaPredicted RBP7.43□□□□□ -1.22
SMARCB1-206ENST00000477836 UBR4Q5T4S7 5183 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 SAA2-SAA4A0A096LPE2 208 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 C3orf85A0A1B0GTC6 90 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 A0A1W2PPE3 182 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 A0A1W2PPI3 338 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 LINC01619G3V211 115 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 H0Y980 276 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 M0R1X1 148 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 RAB29O14966 203 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 MPPED1O15442 326 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 PGLYRP1O75594 196 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 IGLV2-14P01704 120 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 OR5AC1P0C628 307 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 TRAPPC2P0DI81 140 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 TRAPPC2BP0DI82 140 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 SAA2P0DJI9 122 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 IL3RAP26951 378 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 RRAS2P62070 204 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 SUPT4H1P63272 117 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 DHODHQ02127 395 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 UTF1Q5T230 341 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF66Q6ZN08 573 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 KCTD9Q7L273 389 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 TGIF2LXQ8IUE1 241 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 C12orf45Q8N5I9 185 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 LINC00311Q8N616 119 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 OR51H1Q8NH63 302 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 MITD1Q8WV92 249 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 HSD17B10Q99714 261 aaKnown RBP7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 AGMATQ9BSE5 352 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 SDHAF2Q9NX18 166 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 KCNIP3Q9Y2W7 256 aa7.42□□□□□ -1.22
SMARCB1-206ENST00000477836 PIGBOS1A0A0B4J2F0 54 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 J3QR06 171 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 B3GALNT1O75752 331 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 F2RP25116 425 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF134P52741 427 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 DIAPH2-AS1Q14236 149 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 RPL39P5Q59GN2 51 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 LGALS9CQ6DKI2 356 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 FAM71F2Q6NXP2 309 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 CEMP1Q6PRD7 247 aaPredicted RBP7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 Q8N9W7 124 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 UXS1Q8NBZ7 420 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 TCTEX1D2Q8WW35 142 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 GALNT14Q96FL9 552 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 C5orf30Q96GV9 206 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 TP53RKQ96S44 253 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 GPHA2Q96T91 129 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 S1PR3Q99500 378 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms