RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MAS1LP35410 378 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 UQCRFS1P47985 274 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 COMPP49747 757 aaPredicted RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 RPL8P62917 257 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 ERHP84090 104 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 CACNA1DQ01668 2161 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 RAB31Q13636 194 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 TMEM41BQ5BJD5 291 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 C10orf91Q5T1B1 145 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 ETV3LQ6ZN32 361 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 SSX9Q7RTT3 188 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 HAPLN4Q86UW8 402 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 SLC24A4Q8NFF2 622 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 BPIFCQ8NFQ6 507 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 OR11H6Q8NGC7 330 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 MBD3L1Q8WWY6 194 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 NARS2Q96I59 477 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 MRPL20Q9BYC9 149 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 COMMD5Q9GZQ3 224 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 SH3BGRL3Q9H299 93 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 TREM1Q9NP99 234 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 WDR83OSQ9Y284 106 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 OR51B2Q9Y5P1 312 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 KPTNQ9Y664 436 aa6.46□□□□□ -1.38
VMA21-203ENST00000477649 ANKHD1Q8IWZ3 2542 aaKnown RBP6.46□□□□□ -1.38
VMA21-203ENST00000477649 BOD1L1Q8NFC6 3051 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 TENM4Q6N022 2769 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 BUB1B-PAK6H3BSN5 160 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 OVOL3O00110 214 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 NDUFS8O00217 210 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 SNAPINO95295 136 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 IFNA1P01562 189 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
VMA21-203ENST00000477649 NPY1RP25929 384 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 CD1BP29016 333 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 PPT1P50897 306 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 SUB1P53999 127 aaKnown RBP eCLIP6.45□□□□□ -1.38
VMA21-203ENST00000477649 LINC00205P59089 165 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 RPS16P62249 146 aaKnown RBP6.45□□□□□ -1.38
VMA21-203ENST00000477649 ARL16Q0P5N6 197 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 GUK1Q16774 197 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 TUSC1Q2TAM9 212 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 TMEM249Q2WGJ8 235 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 C2orf83Q53S99 150 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 AVPI1Q5T686 147 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 MINOS1Q5TGZ0 78 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 OR8G2PQ6IF36 304 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 CCDC144NLQ6NUI1 221 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 C1orf229Q6ZS94 237 aaPredicted RBP6.45□□□□□ -1.38
VMA21-203ENST00000477649 MMD2Q8IY49 270 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 CACNG8Q8WXS5 425 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 RPEQ96AT9 228 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 LINC00052Q96N35 136 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 SRSF8Q9BRL6 282 aaKnown RBP6.45□□□□□ -1.38
VMA21-203ENST00000477649 MS4A7Q9GZW8 240 aaPredicted RBP6.45□□□□□ -1.38
VMA21-203ENST00000477649 UBTD1Q9HAC8 227 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 NPVFQ9HCQ7 196 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 INSIG2Q9Y5U4 225 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 MINOS1-NBL1R4GNA1 71 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 PCNX1Q96RV3 2341 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 HCFC1P51610 2035 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 DSCAML1Q8TD84 2053 aa6.45□□□□□ -1.38
VMA21-203ENST00000477649 ARFGEF3Q5TH69 2177 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 UBE2L5PA0A1B0GUS4 154 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 CYSRT1A8MQ03 144 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 F8W036 122 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 LYNX1G3V0Z9 82 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 CYB5BO43169 146 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 FOXH1O75593 365 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 IGKV1-16P04430 117 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 IFNA4P05014 189 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 SAA1P0DJI8 122 aaPredicted RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 LYNX1P0DP58 116 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 FGF7P21781 194 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 HTR1DP28221 377 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 GPX4P36969 197 aaPredicted RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 PDLIM4P50479 330 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 ACOT6Q3I5F7 207 aaPredicted RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 KHDC3LQ587J8 217 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 RBMS3Q6XE24 437 aaKnown RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 OR10G4Q8NGN3 311 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 SUN5Q8TC36 379 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 ACTR3CQ9C0K3 210 aaPredicted RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 NDUFA4L2Q9NRX3 87 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 DPM3Q9P2X0 92 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 ATMQ13315 3056 aa6.44□□□□□ -1.38
VMA21-203ENST00000477649 RAI1Q7Z5J4 1906 aaPredicted RBP6.44□□□□□ -1.38
VMA21-203ENST00000477649 CFAP46Q8IYW2 2715 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 SPENQ96T58 3664 aaKnown RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 CTXND1A0A1B0GTU2 59 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 TEX50A0A1B0GTY4 177 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 SRRM4A7MD48 611 aaKnown RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 PRSS46E5RG02 174 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 LY6LH3BQJ8 138 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 CORTO00230 105 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 IGHV2-5P01817 119 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 APOC3P02656 99 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 HSPB1P04792 205 aaKnown RBP6.43□□□□□ -1.38
VMA21-203ENST00000477649 OPRK1P41145 380 aa6.43□□□□□ -1.38
VMA21-203ENST00000477649 DSCR9P59020 149 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms