RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ALKBH4Q9NXW9 302 aa10.63□□□□□ -0.71
RTFDC1-207ENST00000477573 MCTS1Q9ULC4 181 aaKnown RBP10.63□□□□□ -0.71
RTFDC1-207ENST00000477573 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 IGHG4P01861 327 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 HIST1H1EP10412 219 aaKnown RBP10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 IGFBP2P18065 325 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 TMEM42Q69YG0 159 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 MOB1BQ7L9L4 216 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 FADS6Q8N9I5 356 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ARHGAP5-AS1Q96IT6 56 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 AMELYQ99218 206 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ANAPC13Q9BS18 74 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 OR2D2Q9H210 308 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 VSIRQ9H7M9 311 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 HES4Q9HCC6 221 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 SPANXB1Q9NS25 103 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 B9D1Q9UPM9 204 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ZNF257Q9Y2Q1 563 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 C2orf70A6NJV1 201 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 B5MCH6 92 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 F8W1H4 67 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ISLRO14498 428 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 CELA2AP08217 269 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 OTX2P32243 289 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 IER3P46695 156 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ACSM6Q6P461 480 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 ZC2HC1AQ96GY0 325 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 TMEM70Q9BUB7 260 aa10.62□□□□□ -0.71
RTFDC1-207ENST00000477573 CTXND1A0A1B0GTU2 59 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 hADV38S2A0JD32 116 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 H3BML4 177 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 SLC16A7O60669 478 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 FABP6P51161 128 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 ID3Q02535 119 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 TESK1Q15569 626 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 PP6455Q8WZ26 134 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 C19orf24Q9BVV8 132 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 TIMM9Q9Y5J7 89 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 R4GMQ9 66 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 A0A0C4DFX4 3053 aa10.61□□□□□ -0.71
RTFDC1-207ENST00000477573 SHISA8B8ZZ34 492 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 ZNF878C9JN71 531 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 MS4A18H0YCH9 400 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 SRSF10O75494 262 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 MPIG6BO95866 241 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 MT-CO3P00414 261 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 MYBPHQ13203 477 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 MS4A18Q3C1V0 323 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 ADAMTSL5Q6ZMM2 481 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 PPP1R32Q7Z5V6 425 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 UEVLDQ8IX04 471 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 CLCF1Q9UBD9 225 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 RALYQ9UKM9 306 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 HELTA6NFD8 242 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 CD300LBA8K4G0 201 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 VWC2LB2RUY7 222 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 NKX2-8O15522 239 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 NTF3P20783 257 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 GRB2P62993 217 aaKnown RBP10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 LRRC75BQ2VPJ9 315 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 NRN1LQ496H8 165 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 ST6GALNAC6Q969X2 333 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 NAT8BQ9UHF3 227 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 ZNF835Q9Y2P0 537 aa10.6□□□□□ -0.71
RTFDC1-207ENST00000477573 ALPK2Q86TB3 2170 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 A0A087X0K7 114 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 IGLV1-36A0A0B4J1U3 117 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 SNAI2O43623 268 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 HLA-DQA1P01909 254 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 SPINK8P0C7L1 97 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 OR9G9P0C7N8 305 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 DSCR4P56555 118 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 RPS18P62269 152 aaKnown RBP10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 BPIFA4PQ86YQ2 179 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 FAM19A2Q8N3H0 131 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 OR10D3Q8NH80 312 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 C1orf147Q96MC9 270 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 TXNDC17Q9BRA2 123 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 CPAMD8Q8IZJ3 1885 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 C21orf140B9A014 251 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 HSBP1O75506 76 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 THBDP07204 575 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 CARD17Q5XLA6 110 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 GLIPR1L1Q6UWM5 242 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 OR51E1Q8TCB6 317 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 SPAG8Q99932 426 aaPredicted RBP10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 SPRY4Q9C004 299 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 TMEM191AQ9H0A3 160 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 OR10A2Q9H208 303 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 ARL2-SNX15V9GYD0 113 aa10.59□□□□□ -0.71
RTFDC1-207ENST00000477573 CACNA1CQ13936 2221 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 EFNA2O43921 213 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 CCL3P10147 92 aa10.58□□□□□ -0.72
RTFDC1-207ENST00000477573 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms