RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 C2orf88Q9BSF0 95 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 DCSTAMPQ9H295 470 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 OR51I1Q9H343 314 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 C11orf1Q9H5F2 150 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 LRTM1Q9HBL6 345 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 IDI2-AS1Q9NZ38 188 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 VPS29Q9UBQ0 182 aa1.09□□□□□ -2.23
TARDBP-208ENST00000477447 ZNF518AQ6AHZ1 1483 aa1.09□□□□□ -2.24
TARDBP-208ENST00000477447 ARAP1Q96P48 1450 aa1.09□□□□□ -2.24
TARDBP-208ENST00000477447 WDR7Q9Y4E6 1490 aa1.09□□□□□ -2.24
TARDBP-208ENST00000477447 MYO15BQ96JP2 1530 aa1.09□□□□□ -2.24
TARDBP-208ENST00000477447 NCOA1Q15788 1441 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 UHRF1BP1Q6BDS2 1440 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 PXDNLA1KZ92 1463 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ERCC6Q03468 1493 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 EXOC1LA0A1B0GW35 172 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 EVPLLA8MZ36 301 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 PPP5D1E7EU14 171 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TSTD3H0UI37 97 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 GPR31O00270 319 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 CST8O60676 142 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ARL6IP5O75915 188 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 IFNA1P01562 189 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 HTR1AP08908 422 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 PVALBP20472 110 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 HIST1H1TP22492 207 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 CDK2P24941 298 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ERP29P30040 261 aaKnown RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 AGTR1P30556 359 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 HINT1P49773 126 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TCL1AP56279 114 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 FGF12P61328 243 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 NAA20P61599 178 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 RUNX1Q01196 453 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SPA17Q15506 151 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SURF2Q15527 256 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ACOT6Q3I5F7 207 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 LIN52Q52LA3 116 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TMEM78Q5T7P6 136 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 HIST2H3PS2Q5TEC6 136 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 RPL13AP3Q6NVV1 102 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ALKAL1Q6UXT8 129 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 C4orf22Q6V702 233 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ST6GALNAC3Q8NDV1 305 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 OR1L8Q8NGR8 309 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TNFAIP8L1Q8WVP5 186 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ASB13Q8WXK3 278 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SMIM12Q96EX1 92 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 CPNE2Q96FN4 548 aaPredicted RBP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ANKRD36BP1Q96IX9 119 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TBX5Q99593 518 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 PHB2Q99623 299 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 MED28Q9H204 178 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 TPT1P8Q9HAU6 139 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 RASL12Q9NYN1 266 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 GSKIPQ9P0R6 139 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 GLS2Q9UI32 602 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 JPT1Q9UK76 154 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 DKKL1Q9UK85 242 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SNX12Q9UMY4 172 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ANGPT4Q9Y264 503 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.08□□□□□ -2.24
TARDBP-208ENST00000477447 ASB4Q9Y574 426 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 SNX10Q9Y5X0 201 aa1.08□□□□□ -2.24
TARDBP-208ENST00000477447 MRC2Q9UBG0 1479 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 KDM5BQ9UGL1 1544 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 IGLV3-9A0A075B6K5 115 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C9orf170A2RU37 121 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 GRIFINA4D1Z8 144 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 OR4C46A6NHA9 309 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C11orf86A6NJI1 115 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SIGLEC16A6NMB1 481 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 UBFD1O14562 309 aaKnown RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 OR2J2O76002 312 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 IFNGP01579 166 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C1QBP02746 253 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 GPX1P07203 203 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 OR13C7P0DN81 318 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 MYL12AP19105 171 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 S100PP25815 95 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 ATP6V0CP27449 155 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 PEBP1P30086 187 aaKnown RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 S100A7P31151 101 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 CCR7P32248 378 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 REG1BP48304 166 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 LINC00313P59037 77 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 HIST1H3AP68431 136 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 BTN3A2P78410 334 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 H3F3AP84243 136 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 PPP1R1AQ13522 171 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 TSNQ15631 228 aaKnown RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 CLEC12BQ2HXU8 276 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SMIM21Q3B7S5 101 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 N4BP2L1Q5TBK1 243 aaPredicted RBP1.07□□□□□ -2.24
TARDBP-208ENST00000477447 C1orf195Q5TG92 126 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 AGTRAPQ6RW13 159 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 HIST2H3AQ71DI3 136 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 GRINAQ7Z429 371 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 COMMD7Q86VX2 200 aa1.07□□□□□ -2.24
TARDBP-208ENST00000477447 SLC35F6Q8N357 371 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms