RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TMPRSS7Q7RTY8 843 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 OR8I2Q8N0Y5 310 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 ST6GALNAC3Q8NDV1 305 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 SLC24A4Q8NFF2 622 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 PROK2Q9HC23 129 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 SH2D2AQ9NP31 389 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 CRIM1Q9NZV1 1036 aa12.71□□□□□ -0.37
CLSTN1-205ENST00000477264 CNOT1A5YKK6 2376 aaKnown RBP12.71□□□□□ -0.38
CLSTN1-205ENST00000477264 FAM90A9PA6NNJ1 464 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 B3GALT5-AS1P59052 145 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 RASL11AQ6T310 242 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 MUC15Q8N387 334 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 LINC00470Q9BZP3 86 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 YTHDF2Q9Y5A9 579 aaKnown RBP12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 RAMP3O60896 148 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 TMPRSS3P57727 454 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 LRRC10Q5BKY1 277 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 GCSAMLQ5JQS6 135 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 GGTLC1Q9BX51 225 aa12.7□□□□□ -0.38
CLSTN1-205ENST00000477264 NEURL1O76050 574 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 GABRA2P47869 451 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 IGFBP7Q16270 282 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 GGNQ86UU5 652 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 FAM122AQ96E09 287 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 FER1L6-AS2Q96M78 137 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 OR2D2Q9H210 308 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 FAM186AA6NE01 2351 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 TRAV34A0A0B4J273 112 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 GFRA1P56159 465 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 CLDN18P56856 261 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 SELENOVP59797 346 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 ETFRF1Q6IPR1 90 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 TSKUQ8WUA8 353 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 ZNF488Q96MN9 340 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 RCHY1Q96PM5 261 aa12.69□□□□□ -0.38
CLSTN1-205ENST00000477264 GVINP1Q7Z2Y8 2422 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 BMPR1BO00238 502 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 CXCL13O43927 109 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 RBMXL2O75526 392 aaKnown RBP12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 SRIP30626 198 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 NHLH1Q02575 133 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 SPATA46Q5T0L3 261 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 HES4Q9HCC6 221 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 PCSK5Q92824 1860 aa12.68□□□□□ -0.38
CLSTN1-205ENST00000477264 C5orf49A4QMS7 147 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 TOX4O94842 621 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 LINC00869P0C866 280 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 GNG4P50150 75 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 RNF151Q2KHN1 245 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 TREML4Q6UXN2 200 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 VASH2Q86V25 355 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 ZNF439Q8NDP4 499 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 ABI3Q9P2A4 366 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 A0A1W2PRS3 328 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 ISLRO14498 428 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 OR2H2O95918 312 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 P04436 131 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 CYB561P49447 251 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 RPL30P62888 115 aaKnown RBP12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 TBR1Q16650 682 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 ABHD17BQ5VST6 288 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 OR4F17Q8NGA8 305 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 WIPF2Q8TF74 440 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 GALMQ96C23 342 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 MGST2Q99735 147 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 WNT10AQ9GZT5 417 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 SLC25A10Q9UBX3 287 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 DOCK10Q96BY6 2186 aa12.67□□□□□ -0.38
CLSTN1-205ENST00000477264 FREM2Q5SZK8 3169 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 ZNF407Q9C0G0 2248 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 RRHO14718 337 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 CCNOP22674 350 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 BPIFB3P59826 476 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 VAMP3Q15836 100 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 HSD17B10Q99714 261 aaKnown RBP12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 ESPL1Q14674 2120 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 SMIM27A0A1W2PRY6 76 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 TMEM30CPA0ZSE6 113 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 C17orf98A8MV24 154 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 H0YJW9 148 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 APCSP02743 223 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 ARG2P78540 354 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 TIGITQ495A1 244 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 CENPWQ5EE01 88 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 OR52E5Q8NH55 327 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 POM121L2Q96KW2 1035 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 VPS25Q9BRG1 176 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 RTL8AQ9BWD3 113 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 COMMD5Q9GZQ3 224 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 TMEM167BQ9NRX6 74 aa12.66□□□□□ -0.38
CLSTN1-205ENST00000477264 J3QR06 171 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 ARR3P36575 388 aa12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 ARF1P84077 181 aaKnown RBP12.65□□□□□ -0.38
CLSTN1-205ENST00000477264 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms