RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 TET2Q6N021 2002 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-206ENST00000477085 IGHV3OR16-10A0A075B7F0 116 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 A0A1B0GW64 132 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 RPS10-NUDT3A0A1W2PQS6 291 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 CGB1A6NKQ9 187 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 B4DSR2 109 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 AVPP01185 164 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 CD1BP29016 333 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 SAA4P35542 130 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 SULT1A1P50225 295 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 F2RL1P55085 397 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 CLINT1Q14677 625 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 PSG5Q15238 335 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 FAM74A1Q5RGS3 127 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 THNSL2Q86YJ6 484 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 BAP18Q8IXM2 172 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 OR8H3Q8N146 312 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 ZNF430Q9H8G1 570 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-206ENST00000477085 HIF1ANQ9NWT6 349 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 PLA2G2EQ9NZK7 142 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 PRNDQ9UKY0 176 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 WNK2Q9Y3S1 2297 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 LGALS4P56470 323 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 BAXQ07812 192 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-206ENST00000477085 RUSC1-AS1Q66K80 236 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 REG4Q9BYZ8 158 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 ARV1Q9H2C2 271 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 NUP50Q9UKX7 468 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 ZNF257Q9Y2Q1 563 aa11.58□□□□□ -0.56
COL4A6-206ENST00000477085 TBL2Q9Y4P3 447 aaKnown RBP11.58□□□□□ -0.56
COL4A6-206ENST00000477085 ZNF469Q96JG9 3925 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-206ENST00000477085 ANKRD34BA5PLL1 514 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 C15orf62A8K5M9 175 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 NPFFO15130 113 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 TPT1P13693 172 aaKnown RBP11.57□□□□□ -0.56
COL4A6-206ENST00000477085 RPL8P62917 257 aaKnown RBP11.57□□□□□ -0.56
COL4A6-206ENST00000477085 HNF4GQ14541 408 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 C10orf55Q5SWW7 151 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 UBAC2Q8NBM4 344 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 OR4A5Q8NH83 315 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 SCARB1Q8WTV0 552 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 RFNGQ9Y644 331 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 SOX21Q9Y651 276 aaPredicted RBP11.57□□□□□ -0.56
COL4A6-206ENST00000477085 AUP1Q9Y679 476 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 ZANQ9Y493 2812 aa11.57□□□□□ -0.56
COL4A6-206ENST00000477085 OOSP1A8MZH6 123 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 RRHO14718 337 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 JTBO76095 146 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 IGHV4-38-2P0DP08 117 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 SSBP2P81877 361 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 PRCDQ00LT1 54 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 VMA21Q3ZAQ7 101 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 FAM120AOSQ5T036 256 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 LINC01356Q8N9X3 169 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 TEX45Q8NA69 505 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 OR10W1Q8NGF6 305 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 VSTM2AQ8TAG5 236 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 MALSU1Q96EH3 234 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 EAF1Q96JC9 268 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 Q96MF0 132 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 C7orf69Q9H7B7 122 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 NDUFA4L2Q9NRX3 87 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 SIGLEC9Q9Y336 463 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 STRAPQ9Y3F4 350 aaKnown RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 LINC00862A6NCI5 91 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 FCN1O00602 326 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 PRSS8Q16651 343 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 PRSS57Q6UWY2 283 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 STX12Q86Y82 276 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 STPG2Q8N412 459 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 TMED6Q8WW62 240 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 PHYHIPLQ96FC7 376 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 RNF5Q99942 180 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 HINT2Q9BX68 163 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 FBXL15Q9H469 300 aa11.56□□□□□ -0.56
COL4A6-206ENST00000477085 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-206ENST00000477085 UNC79Q9P2D8 2635 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 MOSP00540 346 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 FGF2P09038 288 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-206ENST00000477085 KLF17Q5JT82 389 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-206ENST00000477085 OR8G2PQ6IF36 304 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 BRD3OSQ6XYD6 125 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 Q8N6K4 173 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 OR1S2Q8NGQ3 325 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 OR5B3Q8NH48 314 aa11.55□□□□□ -0.56
COL4A6-206ENST00000477085 TSNAXQ99598 290 aaKnown RBP11.55□□□□□ -0.56
COL4A6-206ENST00000477085 GINS3Q9BRX5 216 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms