RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 MALSU1Q96EH3 234 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 MRPL20Q9BYC9 149 aaKnown RBP9.37□□□□□ -0.91
NUP188-205ENST00000477069 TMPRSS5Q9H3S3 457 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 BET1LQ9NYM9 111 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 IGHV1-69-2A0A0G2JMI3 117 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 SOX15O60248 233 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 YIF1AO95070 293 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 AGAP20933 346 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 CHRNB4P30926 498 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 OPRK1P41145 380 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 TMEM249Q2WGJ8 235 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 FAM24BQ8N5W8 94 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 SLC24A4Q8NFF2 622 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 OR5AN1Q8NGI8 311 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 LINC01560Q8TB33 94 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 GGTLC1Q9BX51 225 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 PRNDQ9UKY0 176 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
NUP188-205ENST00000477069 RP1L1Q8IWN7 2480 aaPredicted RBP9.37□□□□□ -0.91
NUP188-205ENST00000477069 H0YJW9 148 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 DEFA4P12838 97 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 RAB5AP20339 215 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 CASP6P55212 293 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 CDSNQ15517 529 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 TMEM155Q4W5P6 130 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 ARSJQ5FYB0 599 aaPredicted RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 WDR25Q64LD2 544 aaPredicted RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 RAB1CQ92928 201 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 ST6GALNAC6Q969X2 333 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 OR2C1O95371 312 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 NPY1RP25929 384 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 TAGLN2P37802 199 aaKnown RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 ZNF137PP52743 207 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 ADORA2A-AS1P86434 159 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 RBMS3Q6XE24 437 aaKnown RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 OSR1Q8TAX0 266 aaPredicted RBP9.36□□□□□ -0.91
NUP188-205ENST00000477069 MANBALQ9NQG1 85 aa9.36□□□□□ -0.91
NUP188-205ENST00000477069 hCG_1809904A0A1W2PP81 198 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 A0A1W2PR64 198 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 A0A1W2PRV1 198 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 ZNF727A8MUV8 499 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 B4DEV8 164 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 FSTL3O95633 263 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 CA2P00918 260 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 SAA1P0DJI8 122 aaPredicted RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 TMEM177Q53S58 311 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 H1FXQ92522 213 aaKnown RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 SDF2L1Q9HCN8 221 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 SPTBN2O15020 2390 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 J3QR06 171 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 CCL21O00585 134 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 CYB5BO43169 146 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 CDC34P49427 236 aaPredicted RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 PNRC1Q12796 327 aaPredicted RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 ZFP82Q8N141 532 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 SAV1Q9H4B6 383 aaPredicted RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 SIRT7Q9NRC8 400 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 PTPRZ1P23471 2315 aaPredicted RBP9.35□□□□□ -0.91
NUP188-205ENST00000477069 TEX50A0A1B0GTY4 177 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 KBTBD11O94819 623 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 C2CD4CQ8TF44 421 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 NABP2Q9BQ15 211 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 TMEM204Q9BSN7 226 aa9.35□□□□□ -0.91
NUP188-205ENST00000477069 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 PCNX1Q96RV3 2341 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 CXorf65A6NEN9 183 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 DIAPH2-AS1Q14236 149 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 ELOBQ15370 118 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
NUP188-205ENST00000477069 TMEM186Q96B77 213 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 NPVFQ9HCQ7 196 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 BIN3Q9NQY0 253 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 RELNP78509 3460 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 SMCO3A2RU48 225 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 TMEM250H0YL14 139 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 IFNA4P05014 189 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 IGHV1-8P0DP01 117 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 PSMB3P49720 205 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 RAB5BP61020 215 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 TMEM242Q9NWH2 141 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 TLN1Q9Y490 2541 aaKnown RBP9.34□□□□□ -0.91
NUP188-205ENST00000477069 PXMP4Q9Y6I8 212 aa9.34□□□□□ -0.91
NUP188-205ENST00000477069 APOA2P02652 100 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 ZNF841Q6ZN19 808 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 PDPNQ86YL7 162 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 C1QL4Q86Z23 238 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 MUC15Q8N387 334 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
NUP188-205ENST00000477069 PLEKHA3Q9HB20 300 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms