RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZNF785A8K8V0 405 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 PPP5D1E7EU14 171 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 GGCTO75223 188 aaKnown RBP8.18□□□□□ -1.1
SEC13-214ENST00000476597 PGLYRP1O75594 196 aaPredicted RBP8.18□□□□□ -1.1
SEC13-214ENST00000476597 OR2C1O95371 312 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 DHFRP00374 187 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 PMP2P02689 132 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 FGF2P09038 288 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 HIST1H1BP16401 226 aaKnown RBP8.18□□□□□ -1.1
SEC13-214ENST00000476597 PRSS3P35030 304 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 OR2B8PP59922 312 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 LYSMD2Q8IV50 215 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 MOB3AQ96BX8 217 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 CMTM3Q96MX0 182 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 ZNF2Q9BSG1 426 aaPredicted RBP8.18□□□□□ -1.1
SEC13-214ENST00000476597 PLEKHA2Q9HB19 425 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 HRASLSQ9HDD0 168 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 EHFQ9NZC4 300 aa8.18□□□□□ -1.1
SEC13-214ENST00000476597 IGLV11-55A0A075B6I3 123 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 LGALS9O00182 355 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 S1PR2O95136 353 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 IGHV3-23P01764 117 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 HLA-AP01891 365 aaKnown RBP8.17□□□□□ -1.1
SEC13-214ENST00000476597 F2RP25116 425 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 TAS2R46P59540 309 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 HERV-K104P61576 105 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 DEFB114Q30KQ6 69 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 CD300EQ496F6 205 aaPredicted RBP8.17□□□□□ -1.1
SEC13-214ENST00000476597 AADACL3Q5VUY0 350 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 CLEC19AQ6UXS0 136 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 OR51H1Q8NH63 302 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 MUC7Q8TAX7 377 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 GPX8Q8TED1 209 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 CCDC140Q96MF4 163 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 SRSF8Q9BRL6 282 aaKnown RBP8.17□□□□□ -1.1
SEC13-214ENST00000476597 FUNDC2Q9BWH2 189 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 RYR2Q92736 4967 aa8.17□□□□□ -1.1
SEC13-214ENST00000476597 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 C2orf70A6NJV1 201 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 REG1AP05451 166 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 CLEC3BP05452 202 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 EIF4EP06730 217 aaKnown RBP8.16□□□□□ -1.1
SEC13-214ENST00000476597 DEFA4P12838 97 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 FOLR2P14207 255 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 ARL3P36405 182 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 NCS1P62166 190 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 HAGHQ16775 308 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 GTSCR1Q86UQ5 136 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 CADM3Q8N126 398 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 DMBX1Q8NFW5 382 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 OR6F1Q8NGZ6 308 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 CITED4Q96RK1 184 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 TECRQ9NZ01 308 aaKnown RBP8.16□□□□□ -1.1
SEC13-214ENST00000476597 COMMD3Q9UBI1 195 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 S4R3C0 116 aa8.16□□□□□ -1.1
SEC13-214ENST00000476597 PLECQ15149 4684 aaKnown RBP8.15□□□□□ -1.1
SEC13-214ENST00000476597 LYSTQ99698 3801 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 TENM2Q9NT68 2774 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 TEX50A0A1B0GTY4 177 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 SMIM31A0A1B0GVY4 71 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 MARCH11A6NNE9 402 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 APOA1P02647 267 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 RLN1P04808 185 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 RPA2P15927 270 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 EDN2P20800 178 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 PTBP1P26599 531 aaKnown RBP eCLIP8.15□□□□□ -1.1
SEC13-214ENST00000476597 HLA-DMAP28067 261 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 HRH1P35367 487 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 LPAR6P43657 344 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 VBP1P61758 197 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 FAM106AQ4KMX7 169 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 ZNF585BQ52M93 769 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 CASC10Q5T4H9 136 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 LINC00322Q6ZN03 302 aaPredicted RBP8.15□□□□□ -1.1
SEC13-214ENST00000476597 LAX1Q8IWV1 398 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 CMTM1Q8IZ96 169 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 FCAMRQ8WWV6 532 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 DGCR14Q96DF8 476 aaKnown RBP8.15□□□□□ -1.1
SEC13-214ENST00000476597 CXorf58Q96LI9 332 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 QTRT1Q9BXR0 403 aaKnown RBP8.15□□□□□ -1.1
SEC13-214ENST00000476597 TUBA4BQ9H853 241 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 SCPEP1Q9HB40 452 aa8.15□□□□□ -1.1
SEC13-214ENST00000476597 MFSD2BA6NFX1 497 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 GPR31O00270 319 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 TRAPPC2P0DI81 140 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 TRAPPC2BP0DI82 140 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 ELK1P19419 428 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 CBLN1P23435 193 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 WT1-ASQ06250 92 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 THOC7Q6I9Y2 204 aaKnown RBP8.14□□□□□ -1.11
SEC13-214ENST00000476597 LPCAT3Q6P1A2 487 aa8.14□□□□□ -1.11
SEC13-214ENST00000476597 HSD17B13Q7Z5P4 300 aaPredicted RBP8.14□□□□□ -1.11
SEC13-214ENST00000476597 OR10W1Q8NGF6 305 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms