RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 RNF152Q8N8N0 203 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 GALNT14Q96FL9 552 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 ZFP57Q9NU63 452 aa23.14■■□□□ 1.29
HOXB3-208ENST00000476342 PLA2G10O15496 165 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 SNAPC5O75971 98 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 NDUFB6O95139 128 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 BTCP35070 178 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 AKR1C2P52895 323 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 GLYATL2Q8WU03 294 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 COMMD5Q9GZQ3 224 aa23.13■■□□□ 1.29
HOXB3-208ENST00000476342 TRAV3A0A0B4J244 114 aa23.12■■□□□ 1.29
HOXB3-208ENST00000476342 PF4V1P10720 104 aa23.12■■□□□ 1.29
HOXB3-208ENST00000476342 ANXA3P12429 323 aa23.12■■□□□ 1.29
HOXB3-208ENST00000476342 TMEM128Q5BJH2 165 aa23.12■■□□□ 1.29
HOXB3-208ENST00000476342 CENPSQ8N2Z9 138 aa23.12■■□□□ 1.29
HOXB3-208ENST00000476342 UPK1BO75841 260 aa23.11■■□□□ 1.29
HOXB3-208ENST00000476342 CDS2O95674 445 aa23.11■■□□□ 1.29
HOXB3-208ENST00000476342 A0A1W2PRX2 142 aa23.1■■□□□ 1.29
HOXB3-208ENST00000476342 SOX15O60248 233 aa23.1■■□□□ 1.29
HOXB3-208ENST00000476342 RPLP1P05386 114 aaKnown RBP23.1■■□□□ 1.29
HOXB3-208ENST00000476342 OR9G9P0C7N8 305 aa23.1■■□□□ 1.29
HOXB3-208ENST00000476342 RPL23AP62750 156 aaKnown RBP23.1■■□□□ 1.29
HOXB3-208ENST00000476342 ASPHD1Q5U4P2 390 aa23.1■■□□□ 1.29
HOXB3-208ENST00000476342 FYTTD1Q96QD9 318 aaKnown RBP23.1■■□□□ 1.29
HOXB3-208ENST00000476342 PRNDQ9UKY0 176 aa23.1■■□□□ 1.29
HOXB3-208ENST00000476342 ADARB2-AS1A8MUL3 147 aa23.09■■□□□ 1.29
HOXB3-208ENST00000476342 APELAP0DMC3 54 aa23.09■■□□□ 1.29
HOXB3-208ENST00000476342 ZNF695Q8IW36 515 aa23.09■■□□□ 1.29
HOXB3-208ENST00000476342 RNASE11Q8TAA1 199 aaKnown RBP23.09■■□□□ 1.29
HOXB3-208ENST00000476342 RBPMSQ93062 196 aaKnown RBP23.09■■□□□ 1.29
HOXB3-208ENST00000476342 RRNAD1Q96FB5 475 aaKnown RBP23.09■■□□□ 1.29
HOXB3-208ENST00000476342 FKBP11Q9NYL4 201 aa23.09■■□□□ 1.29
HOXB3-208ENST00000476342 TRRAPQ9Y4A5 3859 aa23.09■■□□□ 1.29
HOXB3-208ENST00000476342 H3BUA1 57 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 RAB9AP51151 201 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 SUPT4H1P63272 117 aaKnown RBP23.08■■□□□ 1.29
HOXB3-208ENST00000476342 LCNL1Q6ZST4 164 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 OR5T1Q8NG75 326 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 OR4A16Q8NH70 328 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 SLA2Q9H6Q3 261 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 NSG2Q9Y328 171 aa23.08■■□□□ 1.29
HOXB3-208ENST00000476342 C15orf61A6NNL5 157 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 IGKV1-5P01602 117 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 MYOD1P15172 320 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 UBE2MP61081 183 aaKnown RBP23.08■■□□□ 1.28
HOXB3-208ENST00000476342 TMEM187Q14656 261 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 THOC7Q6I9Y2 204 aaKnown RBP23.08■■□□□ 1.28
HOXB3-208ENST00000476342 SLC25A42Q86VD7 318 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 FAM110DQ8TAY7 271 aaPredicted RBP23.08■■□□□ 1.28
HOXB3-208ENST00000476342 TMEM56Q96MV1 263 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 ZNF355PQ9NSJ1 428 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 TMEM56-RWDD3S4R434 201 aa23.08■■□□□ 1.28
HOXB3-208ENST00000476342 TEX22C9J3V5 150 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 E7EUB6 86 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 SLC6A1P30531 599 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 OR2B8PP59922 312 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 SRPXP78539 464 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 TMEM268Q5VZI3 342 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 MZT2BQ6NZ67 158 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 FAM219AQ8IW50 185 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 OR4F17Q8NGA8 305 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 OR1L8Q8NGR8 309 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 IL22RA2Q969J5 263 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 OR4F4Q96R69 305 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 QTRT1Q9BXR0 403 aaKnown RBP23.07■■□□□ 1.28
HOXB3-208ENST00000476342 KLK15Q9H2R5 256 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 OR51B2Q9Y5P1 312 aa23.07■■□□□ 1.28
HOXB3-208ENST00000476342 PIGBOS1A0A0B4J2F0 54 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 HMX3A6NHT5 357 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 NUDT19A8MXV4 375 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 RBMXL2O75526 392 aaKnown RBP23.06■■□□□ 1.28
HOXB3-208ENST00000476342 VAMP1P23763 118 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 CDX1P47902 265 aaPredicted RBP23.06■■□□□ 1.28
HOXB3-208ENST00000476342 SELENOHQ8IZQ5 122 aaKnown RBP23.06■■□□□ 1.28
HOXB3-208ENST00000476342 OR5B3Q8NH48 314 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 LHFPL5Q8TAF8 219 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 MYOZ3Q8TDC0 251 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 TMEM14BQ9NUH8 114 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 COA4Q9NYJ1 87 aa23.06■■□□□ 1.28
HOXB3-208ENST00000476342 ASAH1Q13510 395 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 PRR31Q5SQ13 230 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 TTC9CQ8N5M4 171 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 KLHL30-AS1Q8NEE0 82 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 CASTOR1Q8WTX7 329 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 SRSF8Q9BRL6 282 aaKnown RBP23.05■■□□□ 1.28
HOXB3-208ENST00000476342 TBC1D24Q9ULP9 559 aa23.05■■□□□ 1.28
HOXB3-208ENST00000476342 P0C879 139 aa23.04■■□□□ 1.28
HOXB3-208ENST00000476342 LGI3Q8N145 548 aa23.04■■□□□ 1.28
HOXB3-208ENST00000476342 UBE2E2Q96LR5 201 aa23.04■■□□□ 1.28
HOXB3-208ENST00000476342 MS4A10Q96PG2 267 aa23.04■■□□□ 1.28
HOXB3-208ENST00000476342 FLVCR2Q9UPI3 526 aa23.04■■□□□ 1.28
HOXB3-208ENST00000476342 TEX50A0A1B0GTY4 177 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 A0A1B0GW64 132 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 BRI3O95415 125 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 TSPAN15O95858 294 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 TRGV3P03979 118 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 TRAPPC2P0DI81 140 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 TRAPPC2BP0DI82 140 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 TPPP2P59282 170 aa23.03■■□□□ 1.28
HOXB3-208ENST00000476342 PPP1R1AQ13522 171 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms