RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 CST9LP1Q5W188 147 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 WDR25Q64LD2 544 aaPredicted RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM200BQ69YZ2 307 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 OR5T1Q8NG75 326 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 CORO2AQ92828 525 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 MRPL20Q9BYC9 149 aaKnown RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 MANBALQ9NQG1 85 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM14BQ9NUH8 114 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 FOXA2Q9Y261 457 aaPredicted RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 PXMP4Q9Y6I8 212 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 CUL9Q8IWT3 2517 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 YLPM1P49750 1951 aaKnown RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 C5orf52A6NGY3 159 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 ZNF98A6NK75 572 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 C11orf94C9JXX5 98 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 E7EQL1 145 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 J3QR06 171 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 KIAA0141Q14154 515 aaPredicted RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM241Q24JQ0 296 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 LRRC10Q5BKY1 277 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 Q8N7P7 452 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 OR10X1Q8NGY0 326 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 RNASE6Q93091 150 aaKnown RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 SSX3Q99909 188 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 PLEKHA3Q9HB20 300 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 NAT8Q9UHE5 227 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 HCFC1P51610 2035 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 SRRM4A7MD48 611 aaKnown RBP7.31□□□□□ -1.24
CCDC66-216ENST00000476142 SHISA9B4DS77 424 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 NECAP1Q8NC96 275 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 MALSU1Q96EH3 234 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 GGTLC1Q9BX51 225 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 PARLQ9H300 379 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 PRNDQ9UKY0 176 aa7.31□□□□□ -1.24
CCDC66-216ENST00000476142 TLN1Q9Y490 2541 aaKnown RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 CXorf65A6NEN9 183 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 CLDN34H7C241 214 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 DVL1O14640 695 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 SOX15O60248 233 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 MPDU1O75352 247 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 FCN3O75636 299 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 KBTBD11O94819 623 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 YIF1AO95070 293 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 APOA2P02652 100 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 OPRK1P41145 380 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 MEF2CQ06413 473 aaPredicted RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 LINC01560Q8TB33 94 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM204Q9BSN7 226 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 GGACTQ9BVM4 153 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 LINC00574Q9H8X3 128 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 PRSS46E5RG02 174 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 ARL14EPLP0DKL9 152 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 MAS1LP35410 378 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 B2MP61769 119 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM30BQ3MIR4 351 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 NCMAPQ5T1S8 102 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 DMRTC2Q8IXT2 367 aaPredicted RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 OR51G1Q8NGK1 321 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 NEIL1Q96FI4 390 aaPredicted RBP7.3□□□□□ -1.24
CCDC66-216ENST00000476142 HARBI1Q96MB7 349 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 NPVFQ9HCQ7 196 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 SPTA1P02549 2419 aa7.3□□□□□ -1.24
CCDC66-216ENST00000476142 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-216ENST00000476142 TMEM250H0YL14 139 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 AP4M1O00189 453 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 UPK2O00526 184 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 UBE2CO00762 179 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 PLAUP00749 431 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CD3EP07766 207 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 IL6RP08887 468 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CHRNB4P30926 498 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 ATP5G3P48201 142 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 MEOX2P50222 304 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CASP6P55212 293 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 DIAPH2-AS1Q14236 149 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 BSXQ3C1V8 233 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 TEPPQ6URK8 271 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CYP2G1PQ6ZSU1 146 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 C16orf82Q7Z2V1 217 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 FAM210BQ96KR6 192 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 VKORC1Q9BQB6 163 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CTSZQ9UBR2 303 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 RAXQ9Y2V3 346 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 KALRNO60229 2985 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 TEX50A0A1B0GTY4 177 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 SEC14L6B5MCN3 397 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 LYNX1G3V0Z9 82 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 LYNX1P0DP58 116 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 IGFBP2P18065 325 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 COL8A2P25067 703 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 NDUFA6P56556 154 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 TMPRSS3P57727 454 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 RPL23P62829 140 aaKnown RBP7.29□□□□□ -1.24
CCDC66-216ENST00000476142 PRB3Q04118 309 aaPredicted RBP7.29□□□□□ -1.24
CCDC66-216ENST00000476142 RAB31Q13636 194 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 PMS2P11Q13670 270 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 CLEC12BQ2HXU8 276 aa7.29□□□□□ -1.24
CCDC66-216ENST00000476142 ZNF833PQ6ZTB9 187 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms