RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 CD1BP29016 333 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 CDX1P47902 265 aaPredicted RBP13.65□□□□□ -0.22
TVP23B-202ENST00000476139 UBE2G2P60604 165 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 S100A12P80511 92 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 C1orf87Q8N0U7 546 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 ZNF709Q8N972 641 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 GFRA3O60609 400 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 CCL3L1P16619 93 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 VDAC2P45880 294 aaPredicted RBP13.65□□□□□ -0.22
TVP23B-202ENST00000476139 OR4A47Q6IF82 309 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 C16orf82Q7Z2V1 217 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 OR4S2Q8NH73 311 aa13.65□□□□□ -0.22
TVP23B-202ENST00000476139 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
TVP23B-202ENST00000476139 ELOVL1Q9BW60 279 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 OPN1MWP04001 364 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 OPN1MW2P0DN77 364 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 OPN1MW3P0DN78 364 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 S100A2P29034 98 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 PSMB3P49720 205 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 OR51G1Q8NGK1 321 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 RND1Q92730 232 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM204Q9BSN7 226 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 PARLQ9H300 379 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 PATZ1Q9HBE1 687 aaKnown RBP13.64□□□□□ -0.23
TVP23B-202ENST00000476139 GAB2Q9UQC2 676 aa13.64□□□□□ -0.23
TVP23B-202ENST00000476139 ZNF729A6NN14 1252 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-202ENST00000476139 B4DEV8 164 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 LYPD2Q6UXB3 125 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 OR51M1Q9H341 326 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 GAR1Q9NY12 217 aaKnown RBP13.63□□□□□ -0.23
TVP23B-202ENST00000476139 RPUSD1Q9UJJ7 312 aaKnown RBP13.63□□□□□ -0.23
TVP23B-202ENST00000476139 TCF19Q9Y242 345 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 ATRXP46100 2492 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 CTXND1A0A1B0GTU2 59 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 FAM90A9PA6NNJ1 464 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 CT45A6P0DMU7 189 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 CT45A5P0DMU8 189 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 CT45A7P0DMV0 189 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 RPL31P62899 125 aaKnown RBP13.63□□□□□ -0.23
TVP23B-202ENST00000476139 PNRC1Q12796 327 aaPredicted RBP13.63□□□□□ -0.23
TVP23B-202ENST00000476139 P2RX4Q99571 388 aa13.63□□□□□ -0.23
TVP23B-202ENST00000476139 SRRM4A7MD48 611 aaKnown RBP13.62□□□□□ -0.23
TVP23B-202ENST00000476139 CORO2AQ92828 525 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 LINC00574Q9H8X3 128 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 FABP4P15090 132 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
TVP23B-202ENST00000476139 SLC25A48Q6ZT89 311 aaKnown RBP13.62□□□□□ -0.23
TVP23B-202ENST00000476139 OR52E5Q8NH55 327 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 FAM216AQ8WUB2 273 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
TVP23B-202ENST00000476139 TRGV8A0A0C4DH27 118 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 hADV38S2A0JD32 116 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 SHISA9B4DS77 424 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM178BH3BS89 294 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 BSXQ3C1V8 233 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM200BQ69YZ2 307 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 TREML4Q6UXN2 200 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 HINT2Q9BX68 163 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 RAB9BQ9NP90 201 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 WDR83OSQ9Y284 106 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 SPTBN4Q9H254 2564 aa13.62□□□□□ -0.23
TVP23B-202ENST00000476139 PPIAL4EA0A075B759 164 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 C15orf61A6NNL5 157 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 E7EQL1 145 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 PPIAL4DF5H284 164 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 PPIAL4FP0DN26 164 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 S100PP25815 95 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 KIR2DS2P43631 304 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 THBS3P49746 956 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 DMRTC2Q8IXT2 367 aaPredicted RBP13.61□□□□□ -0.23
TVP23B-202ENST00000476139 RNASE6Q93091 150 aaKnown RBP13.61□□□□□ -0.23
TVP23B-202ENST00000476139 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 PPIAL4AQ9Y536 164 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 PRSS46E5RG02 174 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.61□□□□□ -0.23
TVP23B-202ENST00000476139 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
TVP23B-202ENST00000476139 KBTBD11O94819 623 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 NPPCP23582 126 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 RND2P52198 227 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 PDLIM3Q53GG5 364 aaPredicted RBP13.6□□□□□ -0.23
TVP23B-202ENST00000476139 H1FXQ92522 213 aaKnown RBP13.6□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 TPRP12270 2363 aaKnown RBP13.6□□□□□ -0.23
TVP23B-202ENST00000476139 PGPEP1LA6NFU8 196 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 MBP02144 154 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 REG1BP48304 166 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 C1orf159Q96HA4 380 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 DIRC2Q96SL1 478 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 TMEM14BQ9NUH8 114 aa13.6□□□□□ -0.23
TVP23B-202ENST00000476139 A0A1W2PPQ1 181 aa13.59□□□□□ -0.23
TVP23B-202ENST00000476139 NKX6-3A6NJ46 265 aa13.59□□□□□ -0.23
TVP23B-202ENST00000476139 PLAUP00749 431 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms