RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 HMX3A6NHT5 357 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 GPR31O00270 319 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 OR2J3O76001 311 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 S1PR2O95136 353 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 TRBV12-3P01733 135 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 FGF2P09038 288 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 NHLRC4P0CG21 123 aaPredicted RBP8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 ZNF182P17025 639 aaPredicted RBP8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 SYNJ2BPP57105 145 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 ERVK-16P61578 105 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 TSPAN5P62079 268 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 C15orf32Q32M92 178 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 GPR107Q5VW38 600 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 COMMD5Q9GZQ3 224 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 TMEM140Q9NV12 185 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 PEMTQ9UBM1 199 aa8.72□□□□□ -1.01
NUDCD3-206ENST00000475952 MARCH11A6NNE9 402 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 E7EUB6 86 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 RBMXL2O75526 392 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 IGLV1-51P01701 117 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 CRYGCP07315 174 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 IL6RP08887 468 aaPredicted RBP8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 DEFA4P12838 97 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 HIST1H1BP16401 226 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 F2RP25116 425 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 PSMB6P28072 239 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 THOC7Q6I9Y2 204 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 LPCAT3Q6P1A2 487 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 C15orf40Q8WUR7 153 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 SRSF8Q9BRL6 282 aaKnown RBP8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 EXTL2Q9UBQ6 330 aa8.71□□□□□ -1.02
NUDCD3-206ENST00000475952 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 H0Y980 276 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 UPK2O00526 184 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 PGLYRP1O75594 196 aaPredicted RBP8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 AREGP15514 252 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 CTRB1P17538 263 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 CTRB2Q6GPI1 263 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 HAPLN4Q86UW8 402 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 LYSMD2Q8IV50 215 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 SLC38A6Q8IZM9 456 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 DGCR14Q96DF8 476 aaKnown RBP8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 FBXL7Q9UJT9 491 aa8.7□□□□□ -1.02
NUDCD3-206ENST00000475952 TRAV3A0A0B4J244 114 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 A0A1B0GW64 132 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 C3orf84H3BNL1 204 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 BMPR1BO00238 502 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 CYB5BO43169 146 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 TPPPO94811 219 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 REG1AP05451 166 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 MYOD1P15172 320 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 ALDH3B2P48448 385 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 OR2B8PP59922 312 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 PHLDA2Q53GA4 152 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 C19orf35Q6ZS72 473 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 HSD17B13Q7Z5P4 300 aaPredicted RBP8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 FCAMRQ8WWV6 532 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 QTRT1Q9BXR0 403 aaKnown RBP8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 SIGLEC8Q9NYZ4 499 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 THYN1Q9P016 225 aa8.69□□□□□ -1.02
NUDCD3-206ENST00000475952 IGLV11-55A0A075B6I3 123 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 IGLC7A0M8Q6 106 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 CGB1A6NKQ9 187 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 PPP5D1E7EU14 171 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 RGS5O15539 181 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 GGCTO75223 188 aaKnown RBP8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 SNAPC5O75971 98 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 KRASP01116 189 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 IFNA6P05013 189 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 RPA2P15927 270 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 TBPP20226 339 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 LPAR6P43657 344 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 UCP3P55916 312 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 RNASE10Q5GAN6 216 aaKnown RBP8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 LCN12Q6JVE5 192 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 TBC1D26Q86UD7 250 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 CLVS1Q8IUQ0 354 aaPredicted RBP8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 SGPP2Q8IWX5 399 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 CADM3Q8N126 398 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 Q8N402 240 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 ARRDC1Q8N5I2 433 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 RAB2BQ8WUD1 216 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 CXorf58Q96LI9 332 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 FANCD2OSQ96PS1 177 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 TSC22D3Q99576 134 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 FAM212BQ9NTI7 297 aaPredicted RBP8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 U3KQK5 164 aa8.68□□□□□ -1.02
NUDCD3-206ENST00000475952 TRBV7-1A0A0A6YYK4 115 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 M0QYG6 137 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 NOL3O60936 208 aaKnown RBP8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 NDUFB8O95169 186 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 CSN3P07498 182 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 TRAPPC2P0DI81 140 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 TRAPPC2BP0DI82 140 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 G6PCP35575 357 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 ARL3P36405 182 aa8.67□□□□□ -1.02
NUDCD3-206ENST00000475952 MRPS10P82664 201 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms